Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01223 ATGTCGAGAATGAAGCATCTACTGAGAAAGCTTCATATCGGTGGCGGAGGTATCAATGACCAACACCACCGGTTGGGGGAAACCCGGGCAAGTACGAGCACGAGTCCGAGTTCCGACCATGGATTAATTACCAATTCCGAATTCAATACGCCTTCTTCTTCTGTACCATCCACGCCGGCTTTCCCTACAATGAGTGCAATAAGCAGTACTACCGAATCGGTTGGTGATCGGACGGCAGGGGGTGATAAGGGCGTTGATTTTAATCTGTTGGAAGAGGAGTTTCAAGTACAGTTGGCTTTGGCAATAAGCGCTTCTGATCCTGAAGGCCAACAGGACCCTGAATCTGCGCAGATCAATGCGGCGAAGCAAATAAGCCTTAGCTGCGATGCTGCTCTTACCGATAGACATCCCCTCATCCAGTTTCAATCGCTTCGTTATTGGAACTATAACTCGCTAGACTATGGGGAGAAAGTGATGGATGGTTTTTATGATGCATGCCATATTGCCTCAAATTCCATTGTGCAAGGGAAGATGCCGTTGTTGGTGGATCTTCAAAGGATGTCTATGTTCAGTAATGTCGACTATGAAGTGATTCTGGTCGACCGCTTACTGGATCCTGAGTTACAGCAACTTGAGAGTAGAGCATGTGCCTTAGCTACAGAGTGTGTCTTGGTCGAACGAGGGATGATCTTGAGTGGCTTGCTACAGAAAATTGCAGATTTAGTTGTGGATAGAATGGGTGGTCCAGTTGAAGATGCCGAGGAGATGTTGCGAAGGTGGACCATCCGGAGACAAGACTTGTGCAATTCTCTAAACACTGTCATCCTCCCTCTTGGGTGTCTAGATTTAGGTCTTTCACGTCACAGGGCCTTGCTTTTCAAGGTGCTTGCTGATAAGGTTAATATTCCATGCATGCTGGTTAAAGGGAGTTACTACACTGGAACTGATGATGGAGCTGTAAACTTGATCAAAATTGATAATGGAAGTGAGTACATTATTGACCTGATGGGTGCTCCTGGTGCTTTAATACCTGCTGAAGTGCCAAGCTGTCAGCTCCAAAATTCTGGATTCAATATCAGAGGCTATACTGAAGTTTCAGATACACCCACAGGCTTACGTTTGATGCTTGATGGTGTAGGTAAAACACCTACAGTTTTATCTGATGTTGACAAAGGTTACAAAAATGGAAGGACAGAGTATGTGGAAGAAGGATCTTTAACAGTTTTACAGAAAAATGCAGACGCTTGCAAACCTGGGGGAAGAAGAAATCAGACAGAGAGACCTGATATGGGGAGGCTTCAGGAACAATGCTCATCTTGTGATAGATCATCACAGGCAAATGGAAAAGTACCATCCCCACAAGAGATGCAAGTCAGAAATGTTTCTGAATATGTGCTTACTGCAGCAAAGGACCCAGAATTTGCACAGAAACTACATGCCGTTTTGTTAGAGAGTGGTGCTTCACCTCCACTGGATCTTTTTTCTGATAAAGGAGTACCAAGGAGGGATTGTCACATACACTCAGAAGAATCAACCAATGAAGACTATGAAAGTTGCAAAAGGGTTAACCAAGCATTAGCGGAGGCTTTAGAATGGGAAATACCATGGGAGGATCTTCATATCGGTGAGCGGATTGGAATTGGTTCATGTGGTGAAGTTTACCATGCTGAGTGGAATGGAACTGAAGTTGCTGTGAAGAAATTTCTGGACCAAGATTTTTCTGGTGATGCATTGGTTCAGTTCAAATACGAAGTTGAGATCATGTTGAGACTGCGACATCCTAATGTTGTTCTTTTCATGGGAGCTATCACTCGCCCCCCGCACTTCTCCATCCTGACAGAGTTTCTTCCTAGGGGGAGCTTATATAGGTTACTGCATCGTCCGAATTCTCAACTTGATGAGAAAAGGAGGATACGTATGGCACTGGATGTGGCTAAGGGAATGAATTACTTGCACACAAGCCATCCTACAATTGTGCATCGAGATCTGAAATCCCCCAATCTACTTGTTGACAAAAATTGGGTTGTCAAGGTTTGTGATTTTGGTTTGTCTCGAATGAAGAACCACACATTTCTATCTTCAAAGTCCACTGCAGGAACGCCTGAATGGATGGCACCAGAAGTTTTAAGGAATGAACCTGCAAATGAAAAGTGTGATGTGTATAGTTTTGGGGTAATATTGTGGGAGTTGACTACTTTGCAAGTTCCATGGAAAGGGTTGAACCCAATGCAAGTGGTTGGAGCTGTTGGTTTCCAGGATAGGCGTCTTGAAATCCCAGGAAATGTTGATCCATCTGTTGCAGAGATAATACGCGATTGTTGGCAAAGGGAGCCACACTTACGTCCTTCTTTTGGGAGGCTCATGACTCGTCTCCGTGGTATTCATCGTCTTATTGTTGAAATACCAGACTTGACAAATCATTCGGAGCACAGAACAAGACAGCGCCAACGGTAA 2454 0.4454 MSRMKHLLRKLHIGGGGINDQHHRLGETRASTSTSPSSDHGLITNSEFNTPSSSVPSTPAFPTMSAISSTTESVGDRTAGGDKGVDFNLLEEEFQVQLALAISASDPEGQQDPESAQINAAKQISLSCDAALTDRHPLIQFQSLRYWNYNSLDYGEKVMDGFYDACHIASNSIVQGKMPLLVDLQRMSMFSNVDYEVILVDRLLDPELQQLESRACALATECVLVERGMILSGLLQKIADLVVDRMGGPVEDAEEMLRRWTIRRQDLCNSLNTVILPLGCLDLGLSRHRALLFKVLADKVNIPCMLVKGSYYTGTDDGAVNLIKIDNGSEYIIDLMGAPGALIPAEVPSCQLQNSGFNIRGYTEVSDTPTGLRLMLDGVGKTPTVLSDVDKGYKNGRTEYVEEGSLTVLQKNADACKPGGRRNQTERPDMGRLQEQCSSCDRSSQANGKVPSPQEMQVRNVSEYVLTAAKDPEFAQKLHAVLLESGASPPLDLFSDKGVPRRDCHIHSEESTNEDYESCKRVNQALAEALEWEIPWEDLHIGERIGIGSCGEVYHAEWNGTEVAVKKFLDQDFSGDALVQFKYEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRLLHRPNSQLDEKRRIRMALDVAKGMNYLHTSHPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKNHTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTLQVPWKGLNPMQVVGAVGFQDRRLEIPGNVDPSVAEIIRDCWQREPHLRPSFGRLMTRLRGIHRLIVEIPDLTNHSEHRTRQRQR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01223 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Pte3g01223 817 Pfam Ethylene-responsive protein kinase Le-CTR1 141 343 - -
Pte3g01223 817 Gene3D Phosphorylase Kinase; domain 1 532 616 - -
Pte3g01223 817 Gene3D Transferase(Phosphotransferase) domain 1 618 800 - -
Pte3g01223 817 MobiDBLite consensus disorder prediction 28 57 - -
Pte3g01223 817 CDD STKc_MAP3K-like 545 791 - -
Pte3g01223 817 Pfam Protein tyrosine and serine/threonine kinase 539 791 IPR001245 GO:0004672|GO:0006468
Pte3g01223 817 ProSiteProfiles Protein kinase domain profile. 539 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01223 817 FunFam Serine/threonine-protein kinase CTR1 618 801 - -
Pte3g01223 817 PRINTS Tyrosine kinase catalytic domain signature 762 784 IPR001245 GO:0004672|GO:0006468
Pte3g01223 817 PRINTS Tyrosine kinase catalytic domain signature 699 709 IPR001245 GO:0004672|GO:0006468
Pte3g01223 817 PRINTS Tyrosine kinase catalytic domain signature 718 740 IPR001245 GO:0004672|GO:0006468
Pte3g01223 817 PRINTS Tyrosine kinase catalytic domain signature 652 670 IPR001245 GO:0004672|GO:0006468
Pte3g01223 817 PRINTS Tyrosine kinase catalytic domain signature 613 626 IPR001245 GO:0004672|GO:0006468
Pte3g01223 817 SUPERFAMILY Protein kinase-like (PK-like) 521 789 IPR011009 -
Pte3g01223 817 SMART serkin_6 539 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01223 817 FunFam Serine/threonine-protein kinase isoform 1 529 617 - -
Pte3g01223 817 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 125 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01223 Pte-Chr3 10432802 10442080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01223 522 809 MAP Kinase Kinase Kinase AT5G11850 82.986 1.40e-169 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pte3g01223 PK_Tyr_Ser-Thr 5.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01223 K04424 - csin:114322677 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01223 3 10432802 10442080 Pte3g01223 3 10432802 10442080 RCT