Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01217 ATGGCTGCCCGAAATTCCACTGGCTTCAATGAATTTCTGCCTCACTTTTATGGCAATCCATTCAACCTTAATGATGAAAACAATGCAATGGGCGGATTTCCGACACTGGATTCAGTACCTGATGAATCATTGCTTGGTAACCAAGTTAGTATTAACTTAACAAGTAACATGAATTTGTCTGACACGGATTCATCACTGGAAAAGAGAAGAACAAGAGATGTCTCCTACATTGGCACCTCTTCTCCATTGGGTGAAGCTGAAATCCAGGATCAATTACCTGGAGCTATACCGGTACCTGCCTCATCTTTGGCTGCATTTCTTGCTTCAAGAATTGCTTTGCAAGAGCATTTAGAGAAATCGACAGCGTTGCCGCCTCCAGTTTATCCATTGGAGTCAACGGGGATATATGTTTCGAATGATTGCTCCCAAAATTTATTGAATCCTATGAGTGAATCGGGCAAGGGTTGTGGGTATGACGAATTGGCAACCAATAGTAATTGGGGTGTGGAACATTTTCAGACATCTTCAGAGCTGGGCGGAATCACTGCAAATAGGACTGGATTTCAGAGGTTCAGTACCCCCGGGAACCTAATTCCCAATGTTCGGTTACCAACTAACAATGCAGACTTGAACTTTGAGCATCATGAAAGTTTCTCTAAATTCAGTAATGAACTTGCCTCAAGTCTTTCAGACTCCCAGCTCAATGTAGTTGGTAGGATGAACATCCTGGATCGATGCTCTGCAGCAAGCTGCTCTGATGCAGCAGTACATGGCTTTAATCCAGCCAGGCTTAGCTTGGAACCATCAAATAGTAGGAGGCTATCTGCGGCTTCTGGTTCAACTAACCAAGTAGAATTCTCACAGGTGATACTAGGTTCAAGCTATCTCTCTGCCATTCAGGAAATTCTAGCTGAAATTGCTAGGTATTCTCTCCTAAACCTGGACAAAGTGCATGGCTCCAGTAGCAAATCATGCTCACCTCTCCTGTCCAACGGAGGAATGCTCGTGAATGCTACTCCTCGATTAGAAATCCAAATAGATTCGAGATTACATATTCCGGCAGTTGAAGCAAAGAACACCCAACTGTTGACACTTCTGCAACTGGTTGATGAGCGGTATAACCAATCGTTGGATGAGATACATACCATTGTATCTGCCTTCCATGCTGCGACTGAATTGGACCCTGGTGTCCATGCTCATTTTGCTCTACAAACTATCTCTCAATTGTATAAGAACTTGCGAGAGAGGATTAGCAACCTTATCCTTGCAGCAGGGTCCAATCTTGAGAACTCTTGCACAAAGCAGAAGGATGAGTCTCTTGAATCTCTGTATATCCATAAGAAATGGGCTCTGCAGCAGTGGAAAAGGAAAGACCAGCAAATATGGAGACCCCAGAGAGGCTTGCCAGAAAAATCAGTCTCGGTCTTGCGTGCTTGGATGTACCAGAACTTCCTTCATCCGTATCCTAAAGAGGCAGAGAAGCATTTGCTTGCTGCAAAAAGTGGTTTGACTACAAGCCAGGTATCCAACTGGTTTATCAATGCCCGTGTGCGACTTTGGAAACCTATGATTGAGGAAATGTATGCAGAGATGAACAGAAAAATGGCATGTGGAAACGAGGGAGGGACAAAATTCAATTGTCAAAGCTACGGTGGCATGATCGATTCAAGCTAG 1674 0.4403 MAARNSTGFNEFLPHFYGNPFNLNDENNAMGGFPTLDSVPDESLLGNQVSINLTSNMNLSDTDSSLEKRRTRDVSYIGTSSPLGEAEIQDQLPGAIPVPASSLAAFLASRIALQEHLEKSTALPPPVYPLESTGIYVSNDCSQNLLNPMSESGKGCGYDELATNSNWGVEHFQTSSELGGITANRTGFQRFSTPGNLIPNVRLPTNNADLNFEHHESFSKFSNELASSLSDSQLNVVGRMNILDRCSAASCSDAAVHGFNPARLSLEPSNSRRLSAASGSTNQVEFSQVILGSSYLSAIQEILAEIARYSLLNLDKVHGSSSKSCSPLLSNGGMLVNATPRLEIQIDSRLHIPAVEAKNTQLLTLLQLVDERYNQSLDEIHTIVSAFHAATELDPGVHAHFALQTISQLYKNLRERISNLILAAGSNLENSCTKQKDESLESLYIHKKWALQQWKRKDQQIWRPQRGLPEKSVSVLRAWMYQNFLHPYPKEAEKHLLAAKSGLTTSQVSNWFINARVRLWKPMIEEMYAEMNRKMACGNEGGTKFNCQSYGGMIDSS* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01217 557 Gene3D - 456 537 - -
Pte3g01217 557 SMART prehox3 284 419 IPR006563 -
Pte3g01217 557 SMART HOX_1 462 526 IPR001356 GO:0003677
Pte3g01217 557 ProSiteProfiles 'Homeobox' domain profile. 459 522 IPR001356 GO:0003677
Pte3g01217 557 Pfam Homeobox KN domain 479 518 IPR008422 GO:0003677|GO:0006355
Pte3g01217 557 CDD homeodomain 462 523 IPR001356 GO:0003677
Pte3g01217 557 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 215 535 - -
Pte3g01217 557 Pfam Associated with HOX 289 418 IPR006563 -
Pte3g01217 557 SUPERFAMILY Homeodomain-like 464 532 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01217 Pte-Chr3 10402105 10406617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01217 158 534 Homeobox Transcription Factor Family AT4G32980 47.644 1.62e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte3g01217 POX 4.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01217 - - qlo:115971200 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01217 3 10402105 10406617 Pte3g01217 3 10402105 10406617 RCT