Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01179 ATGGGTGTGTATCTCAGCACTCCAAAAACAGAGAAATTTTCTGAGGATGGTGAGAATGGTCGGCTTAGATATGGCTTATCATCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCTGCATTTCCTGACCTGGATGAGTCGGCTTCATTTTTTGGTGTTTATGACGGTCATGGAGGTAAGGTGGTCGCAAAATTTTGTGCCAAATTTCTACATCAACAAGTTCTCAAGAGTGAAGCATACGCAGCTGGAGACATTGGAACCTCTCTACAGAAATCCTTTTTCAGAATGGACAAGATGATGCGTGGACAAAGAGGATGGCGAGAGTTAGCTGTTCTAGGAGATAAATTAAACAAGTTTACTGGGATGATAGAAGGATTGATTTGGTCCCCTAGAAGTAATGGTGCTAATGATCAATCAGATGATTGGGCTTTTGAGGAGGGACCTCACTCCGATTTTTCTGGACCAACTTCAGGAAGCACGGCCTGTGTGGCAGTTATTAAAAACAATCAGATTTATGTTGCAAACGCTGGTGATTCACGCTGTGTGATTTCTAGGAAGGGTCAGGCATATGATTTGTCTAGAGATCATAAACCAGATTTAGAGGTGGAGAGCGACAGGATTTTGAAAGCTGGTGGCTTCATTCATGCAGGAAGAGTCAATGGCAGTTTAAATCTTGCTAGGGCTATAGGTGATGTGGAATTTAAGCAGAATAAATTTTTGCCTGCTGAGAAACAAATCGTGACTGCCATGCCAGATATCAACATGGTTGAGCGTTCTGATGAGGATGAGTTCATGGTGCTGGCTTGTGATGGGATCTGGGATTGCATGTCAAGCCAGCAAGTTGTAGACTTTATACATGAACAACTAAAGTCGGAAACAAAACTGTCAGTGGTGTGTGAGAGAGTAATGGATCGGTGTTTAGCACCAGCAGCTGGTGGTGAGGGATGTGACAACATGACGATGATACTGGTTCTGTTTAAGAAACCCTTGCAGTCAACTGCACCAGCAGAAGAGCAATGCTCTCCAGACAAAGCAACAGCCACTGAGACAGCACTACAGGAGAGTAAATGCCAATAG 1083 0.4404 MGVYLSTPKTEKFSEDGENGRLRYGLSSMQGWRATMEDAHAAFPDLDESASFFGVYDGHGGKVVAKFCAKFLHQQVLKSEAYAAGDIGTSLQKSFFRMDKMMRGQRGWRELAVLGDKLNKFTGMIEGLIWSPRSNGANDQSDDWAFEEGPHSDFSGPTSGSTACVAVIKNNQIYVANAGDSRCVISRKGQAYDLSRDHKPDLEVESDRILKAGGFIHAGRVNGSLNLARAIGDVEFKQNKFLPAEKQIVTAMPDINMVERSDEDEFMVLACDGIWDCMSSQQVVDFIHEQLKSETKLSVVCERVMDRCLAPAAGGEGCDNMTMILVLFKKPLQSTAPAEEQCSPDKATATETALQESKCQ* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01179 360 CDD PP2Cc 23 328 IPR001932 -
Pte3g01179 360 Gene3D - 1 329 IPR036457 -
Pte3g01179 360 MobiDBLite consensus disorder prediction 336 360 - -
Pte3g01179 360 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Pte3g01179 360 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Pte3g01179 360 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Pte3g01179 360 Pfam Protein phosphatase 2C 142 313 IPR001932 -
Pte3g01179 360 SUPERFAMILY PP2C-like 3 329 IPR036457 -
Pte3g01179 360 SMART PP2C_4 13 326 IPR001932 -
Pte3g01179 360 PANTHER PROTEIN PHOSPHATASE 2C 21 326 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01179 Pte-Chr3 10055403 10061068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01179 1 340 PP2C-type Phosphatase Gene Family AT2G25070 76.246 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01179 K17499 - zju:107419763 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01179 3 10055403 10061068 Pte3g01179 3 10055403 10061068 RCT