Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01176 ATGGCTTCTAAAGCTGCTTTGAATGCCCCAGTTTGTAATGTTGTTTCCGTCATCTTCCTTTTCTTCACCGTATCAGGAGCTTCGACGACTCACTACGTTGGAGGCGAGATCCACGGATGGAAAATAGCAAAATGGAAGCATCTTCCCGATCACATGTTACCTCTCAATCGCTGGGCCAGGCGTACTCCGTTTCAAGTTTGGGATTTTCTTGAATGGAACATTAATCCTTCCGTTGACTCGGTGTTGAGGGTGACGAAGAAAGATTACAAACATTGCAATACAGAGAGACCTATGGACCGATTCCTTGGTGGTAAAGTTAGGGTTCTGCTTGACAGACGAGGACCATTTTTCTTCATCAGCGGAAACCGCAAACTTTGTAAGTCGGGTGAGAAGCTTCACGTCGTGGTACGGTTGACTCCCAGAACCAAGCTCACTGCTCCTGAAACCGTCGCTCTTCGAGCACGGCCAGCTCTAACAAGTCAACCTGGTTGTACGCCTTCATCGGCAACTGGTCCTGTAATCAGTTCTGGAAGTTCATCTCTTGCTCCCACCAGCACTGCCATGCAGACTGGAATTCTCTTGTTCATACTGGGCGCGCTAGCTGTATGTCTATGA 615 0.4829 MASKAALNAPVCNVVSVIFLFFTVSGASTTHYVGGEIHGWKIAKWKHLPDHMLPLNRWARRTPFQVWDFLEWNINPSVDSVLRVTKKDYKHCNTERPMDRFLGGKVRVLLDRRGPFFFISGNRKLCKSGEKLHVVVRLTPRTKLTAPETVALRARPALTSQPGCTPSSATGPVISSGSSSLAPTSTAMQTGILLFILGALAVCL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01176 204 MobiDBLite consensus disorder prediction 160 180 - -
Pte3g01176 204 Pfam Plastocyanin-like domain 54 129 IPR003245 GO:0009055
Pte3g01176 204 ProSiteProfiles Phytocyanin domain profile. 29 138 IPR003245 GO:0009055
Pte3g01176 204 MobiDBLite consensus disorder prediction 158 180 - -
Pte3g01176 204 PANTHER BLUE COPPER PROTEIN 29 160 IPR039391 GO:0009055
Pte3g01176 204 Gene3D - 29 146 IPR008972 -
Pte3g01176 204 SUPERFAMILY Cupredoxins 28 136 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01176 Pte-Chr3 10038801 10039503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01176 14 162 Phytocyanin Superfamily AT2G25060 38.411 1.26e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01176 - - nnu:104603267 114.005