Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01172 ATGGACTGTAAATGGGTGGATACATCTCTCAGCCTCCATGTCAGTCCTTCGAGTTCGAGGCATAAGATCATTGATGACCTACAGAGAGGAGAACATGCCAAGGACTATGCAAAATCTGAAGGGCAAGCAAAGGATTTAACGGCTGTGGATCAGATTGAAGAGTTACAGAGGGTAACGTCAGAGAATAAGAAACTAACTGAGATGCTGACTGTCATGTGCAAGAAGTACAGTGCCTTGCATAACCATTTGACAGGTTTGATGAGCAAGAGTTCTGAAGAAGACTCAAGGAAGAGAAAGCTGGCCGACAATGAGATTGCTTCTGATGTCAACATGTCTGAAGTTCATGGTAATGAGTGCAGCTCTAGTGTGGATGAAGATAAATCATGCAAAAGGCCGAAGCAAGATTACAGGAAAAAGGTTTCAAGAGTTCTTGTACGGACAGATTCTTCTGATACTAGCCAACATGTGAAGGACGGATATCACTGGAGAAAATATGGTCAGAAGGTCACAAGAGATAACCCTTCGCCTAGGGCTTACTTTAAGTGTTCCTATGCCCCCGACTGCCCTGTTAGGAAGAAGGTGCAAAGAAGTATGGAAGACCCATCATTGTTAGTAGCAATTTACGAAGGAGAACACAACCACAAAAGACCTGCTCAAGCAGAATTGCCAGTTGGGTCATTCCATGCCGTAAACCTTGGTTGTCCTCAGTCTCTTCCAGCTTCCACGAAAACCCCAGCAACTCCAGCAGTGACTCTTGATTTGGTTCAACAAATGGCTGCTTCATTAACAAAAGATCCCAGTTTTGCAACAGCACTTGCCACAGCCATTTCAGGAAGAATACTGGACGAGACTCGAATGAATGGATGA 867 0.4441 MDCKWVDTSLSLHVSPSSSRHKIIDDLQRGEHAKDYAKSEGQAKDLTAVDQIEELQRVTSENKKLTEMLTVMCKKYSALHNHLTGLMSKSSEEDSRKRKLADNEIASDVNMSEVHGNECSSSVDEDKSCKRPKQDYRKKVSRVLVRTDSSDTSQHVKDGYHWRKYGQKVTRDNPSPRAYFKCSYAPDCPVRKKVQRSMEDPSLLVAIYEGEHNHKRPAQAELPVGSFHAVNLGCPQSLPASTKTPATPAVTLDLVQQMAASLTKDPSFATALATAISGRILDETRMNG* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01172 288 ProSiteProfiles WRKY domain profile. 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g01172 288 SUPERFAMILY WRKY DNA-binding domain 152 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g01172 288 MobiDBLite consensus disorder prediction 114 135 - -
Pte3g01172 288 MobiDBLite consensus disorder prediction 87 106 - -
Pte3g01172 288 Pfam WRKY DNA -binding domain 157 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g01172 288 Gene3D WRKY domain 138 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g01172 288 SMART WRKY_cls 156 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g01172 288 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 32 255 IPR044810 GO:0003700
Pte3g01172 288 MobiDBLite consensus disorder prediction 87 104 - -
Pte3g01172 288 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01172 Pte-Chr3 9992612 9994793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01172 52 283 WRKY Transcription Factor Family AT1G80840 45.865 1.60e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte3g01172 WRKY 9.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01172 - - tcc:18587712 253.832