LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte3g01171	ATGGCCGCGAGGCGAATTCTATTTGGTAAATATGAAAGGGGCAGACTTTTGGGGAAGGGGACGTTTGCCAAAGTCTATTATGGCAGACAAATCGGAACAGGAGAAAGTGTTGCCATCAAAATCGTTAGCAAAGACCAAGTCAAGAGAGAAGGGATGATGGAGCAGATCAAGCGTGAGATATCAATCATGCGCTTGGTTCGCCACCCCAACATAGTTCAGCTCAAGGAGGTCCTGGCCACCAAGACCAAGATTTTCTTTGTCATGGAGTATGCTCGAGGTGGTGAGCTCTTCGAAAAAGTTGAAAAAGGCAAATTGAAAGAAGACGTTGCCCGTAAGTACTTTCAACAGCTAATCAGTGCCGTGGATTTCTGCCATAGCAGAGGGGTCTCACATAGAGATCTCAAGCCTGAAAATTTACTCCTTGATGAGAATGAAGATCTCAAGATTACCGATTTCGGTCTCTCTGCTTTGCCGGAACAGATCAGAAATGATGGACTCCTTCACACCCTGTGTGGAACACCAGCATATGTAGCCCCTGAAGTGTTGAGGAAGAAAGGGTATGATGGTTCTAAGGCTGATATCTGGTCATGTGGTATTGTTCTTTACGTGTTGCTAGCTGGGTTTCTTCCTTTTCCAAATGAGAACATAATGAATATGTACAGAAAGGTTTTCAACGCTGATTATCAATTTCCAGCGTGGTTTTCACAAGAATCCAAGGATTTGATCTCTAAGCTACTTGTGGTAGACCCAGAAAGCCGTATTTCCATTGCTGAGATAATGCACGATCCTTGGTTTAGGAAAGGGTTCAAACCACCCATCGCGTTTTCTGTAGAAGAAACAGCATCAAGTACGGACAAATTAGCTGAAGAAGAACAAGGAGAATCGGCGGACTCAGAACAAAAGTCCCCACAGAGAAAACGTCCCAAGTTTTGCAACGCCTTCGAGTTCATCTCTTCCATGTCCTATGGGCTCGACTTGTCAAGTTTGTTTGAGAATAAAAGGAAATCCGGGACAATGTTCACGTCAAAATGTTCGGCTTCCACAATTATGTCAGCCATCGACAAGGTGGCAAATAGCTTGAGTTTCAAGGTAGCGAGTCTGAAGGACTTCAAGGTTAGGCTACAAGGGCCATCTGAAGGTAGGAAGGGGAGGTTGTCGTTCACGGCAGAGGTATTGGAGGTGGCGCCGGAGCTTGCCATCGTTGAATTCTGCAAATCGTCCGGCGATACCATGGAGTATGCCAGGCTATGCGATGAAGAAATCAGGCCATCATTGAAAGACATTGTTTGGACATGGCAAGGTGACATCTTACCTATCGGCAATCTGAACAGTGGTGATGGTGAAGTATGTGAAAACTAA	1359	0.4525	MAARRILFGKYERGRLLGKGTFAKVYYGRQIGTGESVAIKIVSKDQVKREGMMEQIKREISIMRLVRHPNIVQLKEVLATKTKIFFVMEYARGGELFEKVEKGKLKEDVARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENEDLKITDFGLSALPEQIRNDGLLHTLCGTPAYVAPEVLRKKGYDGSKADIWSCGIVLYVLLAGFLPFPNENIMNMYRKVFNADYQFPAWFSQESKDLISKLLVVDPESRISIAEIMHDPWFRKGFKPPIAFSVEETASSTDKLAEEEQGESADSEQKSPQRKRPKFCNAFEFISSMSYGLDLSSLFENKRKSGTMFTSKCSASTIMSAIDKVANSLSFKVASLKDFKVRLQGPSEGRKGRLSFTAEVLEVAPELAIVEFCKSSGDTMEYARLCDEEIRPSLKDIVWTWQGDILPIGNLNSGDGEVCEN*	453

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte3g01171	452	ProSitePatterns	Protein kinases ATP-binding region signature.	17	40	IPR017441	GO:0005524
	Pte3g01171	452	FunFam	Non-specific serine/threonine protein kinase	4	306	-	-
	Pte3g01171	452	Pfam	Protein kinase domain	11	265	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte3g01171	452	SUPERFAMILY	Protein kinase-like (PK-like)	7	292	IPR011009	-
	Pte3g01171	452	CDD	CIPK_C	312	426	-	-
	Pte3g01171	452	Gene3D	Phosphorylase Kinase; domain 1	2	90	-	-
	Pte3g01171	452	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	129	141	IPR008271	GO:0004672\|GO:0006468
	Pte3g01171	452	Gene3D	Kinase associated domain 1, KA1	305	431	-	-
	Pte3g01171	452	ProSiteProfiles	NAF domain profile.	306	331	IPR018451	GO:0007165
	Pte3g01171	452	CDD	STKc_SnRK3	10	264	-	-
	Pte3g01171	452	FunFam	Non-specific serine/threonine protein kinase	2	90	-	-
	Pte3g01171	452	ProSiteProfiles	Protein kinase domain profile.	11	265	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte3g01171	452	FunFam	Non-specific serine/threonine protein kinase	306	430	-	-
	Pte3g01171	452	SMART	serkin_6	11	265	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte3g01171	452	MobiDBLite	consensus disorder prediction	286	307	-	-
	Pte3g01171	452	Pfam	NAF domain	308	365	IPR004041	GO:0007165
	Pte3g01171	452	Gene3D	Transferase(Phosphotransferase) domain 1	91	271	-	-
	Pte3g01171	452	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	6	426	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte3g01171	Pte-Chr3	9983335	9985443	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte3g01171	4	435	CBL-interacting serine-threonine protein kinases	AT5G10930	70.670	0.0	635

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Pte3g01171		Pkinase	8.2e-78	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte3g01171	-		-	tcc:18587713	673.7