Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01165 ATGGAAAAGCTTGGCATAGAGCATTCCTTCCCTAATAACCCAAGTATAGTGCAGCCTTCTCTAGAGGCTTCTCCATCTCCCAATAAAAACCCAGTACTGAATGTAATAGAGAAGGAGGCAGAGGAAGAGAGTTGTCAAGATCTAGGGAGTCATTGTGAACTCAATCTTATTAATTGCCTGGACAAAAGTTCATCAGCAACTTCATCTGAAACTCCCCAAGCTTCCGAAGCTGAACACAGGGTTTTCACTTGCAACTATTGTCAGAGAATATTTTACAGCTCACAAGCACTGGGAGGACATCAAAATGCACACAAGAGGGAAAGGACTATAGCAAGAAGAGGACAGAAATTAGGAGCACAGATGATGGCCTCAGCAACTGCTTTTGGAATACATCCATATTTGCATGGCCAAAGTTACTCAAGCATTGCTTCTCTACCTCTACATGGTGTTTCTCACAGTCCACCTCTTGGAATTCAAGCTCACTCCATGATTCACAAGCCTGCTTACGTATCTGCTGGTGCTGGTTTTGGTGTTACGTATAGGCAGCAAGTTTGGTCAAGTCGACCTGCCGCCATCGTACAACAACCAGGAATAGGGAAGCTGGACAGAGTTGGAAGTTTTGACAGAACAACAGTGGGATTGTCATCACTGGGTAATATAGGTAAATTTGACATTGGGAAGACGACGTTTACATCTGAAATTGAAGATGAAATTGGTGGTTATAGGATTGCTGGAAGTCATTTGAAGACTGATAACCAAGACATGAAGCCTCTTGACTTGTCTTTAACGCTCTAA 795 0.4302 MEKLGIEHSFPNNPSIVQPSLEASPSPNKNPVLNVIEKEAEEESCQDLGSHCELNLINCLDKSSSATSSETPQASEAEHRVFTCNYCQRIFYSSQALGGHQNAHKRERTIARRGQKLGAQMMASATAFGIHPYLHGQSYSSIASLPLHGVSHSPPLGIQAHSMIHKPAYVSAGAGFGVTYRQQVWSSRPAAIVQQPGIGKLDRVGSFDRTTVGLSSLGNIGKFDIGKTTFTSEIEDEIGGYRIAGSHLKTDNQDMKPLDLSLTL* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01165 264 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 42 264 IPR044246 GO:0009788
Pte3g01165 264 MobiDBLite consensus disorder prediction 11 31 - -
Pte3g01165 264 MobiDBLite consensus disorder prediction 1 31 - -
Pte3g01165 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
Pte3g01165 264 FunFam Zinc finger protein 2 60 128 - -
Pte3g01165 264 Gene3D Classic Zinc Finger 61 129 - -
Pte3g01165 264 SUPERFAMILY beta-beta-alpha zinc fingers 79 109 IPR036236 -
Pte3g01165 264 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01165 Pte-Chr3 9949566 9950646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01165 53 265 C2H2 Transcription Factor Family AT5G10970 43.363 7.19e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte3g01165 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01165 - - vvi:100245739 228.794