Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01161 ATGTTCATTACAGAGAAGAAAGAGGATTTGGCTAGAGAAGACTCTAATAAATTTAGTCTTATCATGAATGAAGTCGAGAGGTTACATGAACTGGTTCAGAAGCCATGGGAGCAAATTGCTGACGCAGAGGCATTGCTGGACTTGGCACAAGCATTAGCTGCATCCGTTAAGTCTATGATTCATGGGGGTGTTACCCCTTCACAATTTTTGCAATATATGATATCAGAATTTGGAAAATTCATAAGGGCTTTACTAGCCGAGAGGATGGCCAAAACAATGTCGACTGGAAATAGATTGAGCTCTCTGTCTCCTCCATGTTCATGA 324 0.4105 MFITEKKEDLAREDSNKFSLIMNEVERLHELVQKPWEQIADAEALLDLAQALAASVKSMIHGGVTPSQFLQYMISEFGKFIRALLAERMAKTMSTGNRLSSLSPPCS* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01161 107 PANTHER UNCHARACTERIZED 4 80 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01161 Pte-Chr3 9925749 9926936 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01161 3 79 Non-SMC Element family AT1G51130 55.844 3.38e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01161 K22825 - jre:108994494 89.3521