Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01159 ATGAAGCTTCTTCTCAGGCTATTTGTGTTGCTGGTTCTTATTCTCAGCGAGCCCATTTGGCTTCAAGCCACTCCAACGCCTGAACCTACCTCACATGTTCTTTCTTCTTCACCGGCAGTGTCACCATTTTCTTCAATTTCATCATCAATGTCTTCCTTCTCTCCAGGTTTTGAGGTAGGAAGTGCAGCGCATCAGAGAAACCAACACAAGAAAATGCTTACAGCACTGATTGTGGTCTCTACTGCACTTAGTGCTATCATTCTGTGTCTCCTTTGCTGGTGGATATATCGTATGACATATCTTTGCAAATCCTACAAGAGACATGCTCCGAGCTCAGATGCTGAGAAAGGTCTCTCATTGGCGCCATTTCTGGGTAAATTTAGTTCCGTAAGAATTGTGGGGAAGAAGGGATCTGTTTCGTTGATTGATTACAAACAAATAGAGAAAGCCACTGGTAATTTTCAGCAAGGTAATATTTTGGGTGAGGGTGGATTTGGATGTGTTTATAAGGCTAGCTTGGATGACAATTTGAATGTAGCAGTCAAGAAACTACACTGTGAAAGTCAGGATGCTGAGAGAGAATTTGAGAATGAGGTGAATTTATTGAGCAAAATTAAGCACTCCAATATAATCTGTCTGCTGGGCTGTAGCGTTAGCAGTGATTCAAAGATAATTGTATATGAATTGATGCACAATGGTTCTTTGGAGACTCAACTACATGGACCATCTCATGGTTCGTCACTAACTTGGCATATGCGGATGAAGATTGCTCTTGATACAGCAAGAGGTTTGGAGTATCTGCATGAGCATTGTCACCCACCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTGGATACAAACTTCAATGCTAAGCTTTCTGATTTTGGTCTTGCCGTAACTGGTGGATCTCAAAACAAAAACAACATCAAGCTTTCAGGCACACTGGGCTATGTAGCGCCTGAATATCTTTTAGATGGAAAATTGACTGATAAAAGTGACGTCTATGCTTTTGGGGTAGTACTCCTTGAACTTCTATTAGGAAGGAAGCCAGTGGAAAAACTGTCACCAGCTCAGTGCCAATCTATTGTCACATGGGCCATGCCTCAACTCACTGACAGGTTGAAGCTTCCAAACATCGTAGATCCTGTGATCAAGGACACGATGGATCTCAAGCATTTATACCAGGTTGCTGCAGTTGCGGTGCTATGCGTGCAAACAGAACCAAGTTACCGCCCACTGATTACAGATGTTCTTCATTCACTCATCCCACTTGTTCCCATAGAGCTCGGAGGAACACTGAGAGTTTCACAAGCTAATCGTGGAGCATCTAGTGCTGAATAA 1350 0.4244 MKLLLRLFVLLVLILSEPIWLQATPTPEPTSHVLSSSPAVSPFSSISSSMSSFSPGFEVGSAAHQRNQHKKMLTALIVVSTALSAIILCLLCWWIYRMTYLCKSYKRHAPSSDAEKGLSLAPFLGKFSSVRIVGKKGSVSLIDYKQIEKATGNFQQGNILGEGGFGCVYKASLDDNLNVAVKKLHCESQDAEREFENEVNLLSKIKHSNIICLLGCSVSSDSKIIVYELMHNGSLETQLHGPSHGSSLTWHMRMKIALDTARGLEYLHEHCHPPVIHRDLKSSNILLDTNFNAKLSDFGLAVTGGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLSPAQCQSIVTWAMPQLTDRLKLPNIVDPVIKDTMDLKHLYQVAAVAVLCVQTEPSYRPLITDVLHSLIPLVPIELGGTLRVSQANRGASSAE* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01159 449 SMART serkin_6 154 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01159 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Pte3g01159 449 Gene3D Transferase(Phosphotransferase) domain 1 230 429 - -
Pte3g01159 449 FunFam Protein kinase superfamily protein 121 229 - -
Pte3g01159 449 CDD STKc_IRAK 160 427 - -
Pte3g01159 449 Gene3D Phosphorylase Kinase; domain 1 125 229 - -
Pte3g01159 449 FunFam probable receptor-like protein kinase At1g80640 230 429 - -
Pte3g01159 449 Pfam Protein kinase domain 154 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01159 449 ProSitePatterns Protein kinases ATP-binding region signature. 160 183 IPR017441 GO:0005524
Pte3g01159 449 SUPERFAMILY Protein kinase-like (PK-like) 135 424 IPR011009 -
Pte3g01159 449 PANTHER OS01G0750732 PROTEIN 35 428 - -
Pte3g01159 449 ProSiteProfiles Protein kinase domain profile. 154 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01159 Pte-Chr3 9901698 9904817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01159 18 370 Receptor kinase-like Gene Family AT1G80640 47.790 8.21e-106 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pte3g01159 Pkinase 7.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01159 - - qsa:O6P43_015740 655.981