Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01150 ATGGGGAAGCCTACTGGGAAAAAGAATGCAAATGCTAATGGCAATGCAGATGGTTATGCCAACGCCAAGCCCGGCACGCCCTCTTCCCTTGATCGAACTCCCTCCAAGGCCTTCGATAAAGACACCACTATGTTCATCAACATGTCGCAGGAACTGAAAGAGGAAGGTAACTGGCTATACCAAAAGAAGGACCACAAAGGTGCTATGTCGAAATACGAGAAGGCACTCAAACTACTTCCTCGGAACCACATTGATGTTGCTCATATCCATTGTAGTATGGCATTGTGTTACATGCAGTTCGGTCTAGGTGAATACCCCCGAGCTATCAGCGAATGCAGTTTAGCCTTAGAAGTATCCCCAAGATATAGTAAAGCTCTATTGAGAAGAGCGAAGTGTTACGTGGCATTGAACCGGTTGGATTTGGCCACGAGAGATGTGAAATTTGTATTAAGCATAGAACCTAACAATGTTACAGCTTTGGAGATTCTGAACAACGTCAAAAACACAATGGAAGAGAAAGGTATCACTTTTGACGAGATAGAGATCAGCTTACCACCCGTTCAGCAGGGTCCTACTGACCGTTTGCGAGAAGTTGTCAAAGAAAAAATTAAGAAAAAGAAGGGTAAGAAAAATGAAAAGGCAGATGATAAGGTGGTTGTGGAGGAGAATCCGAATGATGTTCAGGATAAAGTAGTGGTCACAAAGATGATGGAGGAAGAAAAGAAGGTTGTAGAACCTGTTAAGGAAGAAAATGTGGTCACAAGGTTTATAAAATTGGTTCTTGGAGAGGATATAAGATGGGCTCAGTTACCCGCGAATTCTAGCATGGGTTCATTGAGGCATATAATCAAAGACCGCTTTCCTGGACTGAAAGGCATGCTTATTAAGTATAGGGATCAAGAAGGTGATCTGGTTACCATTACTTCCACTGCTGATGTGAGGTTGGCTGAATCTTCAGCTGACATACAAGGTTCTCTTCGATTATACATTACTGAGGTCAACCCTGATAAGGAACCGGCTTATGAGGAAGCTCCCAAAGAGGAAGCAAGGGGTACAGATGATAAAAGGGCATCTAATGTGTGTGAGGACAGAGATGTTTGGAGCGGGAAGGAAGTGGCTACGGGGTTGACTACTGTTGAGGACTGGATCCTCCAATTTGCGAGGTTGTTCAAGAATCATGTTGGATTTGATTCTGATTCATATTTGGATCTTCATGAGCAGGGGATGAAGCTGTATTCAGAAGCCATGGAGGACACTATAACAAGTGATGATGCTCAAGAACTCTTCGACGTTGCTGCTGCGAAATTTCAAGAGATGGCAGCTTTGGCTTTATTTAATTGGGGTAATGTTCACATGTCCAGGGCAAGGAAGTGGTGCTTGTTTCCAGAGGATGTGGATTTGGGATCTGATCTAGAGCCCATCAAGGCCGCATACGAATGGGCACAAAAGGAGTACATGATGGCAAAGAGGAAATATGAAGAGGCCTTGACAATCAAACCGGACTTTTATGATGGCTTTCTTGCACTCGGTCATCAGCAGTTTGAGCAAGCAAAACTTAGTTGGTACTATGCACTTGCAAACAAGAAGGACTTAGAAATAGAAGATGGTTCTGCTGAAGAGGTACTTGAGCTCTACAACAAAGCTGAGGACAGCATGGAAAATGGCATGCTCATGTGGGAGGAGATGGAGGAAAAGCGACCTAACGGTGTTCCCACACTTCACAGGAGTAAGTCTCAACTGGAGAATATGGGACTGAATGGACTTTCTAAAGATATTTCTCCTAATGAAACTTCGGAGCGGGCTTCAAACATGAGGTCACAAATATTCCTTTTATGGGGCACTCTCCTGTACGAACGTTCCATTGTTGAATGTAAGTTAGGCCTGCCAACATGGCCAGAATGTTTAGAGGTTGCAGTAGAGAAGTTTGAACTTGCTGGAGCTTCTCCAACAGATGTTGCGGTTATGATGAAGAACCATTGTTCTAATGAAACTGCACTTGATGGGTTCAAAGTTGATGAGATAGTACAGGCATGGCATGAGATGAATAATGTCCAGAGGTGGCAGTTTGGTGTTCCTGCTTTCCGGCTTGAACCATTATTTCGTCGACGTGTCCCGAGACTGCATCATATCATGGAGCGTTTTTCTGTTCTTTCTTGA 2157 0.439 MGKPTGKKNANANGNADGYANAKPGTPSSLDRTPSKAFDKDTTMFINMSQELKEEGNWLYQKKDHKGAMSKYEKALKLLPRNHIDVAHIHCSMALCYMQFGLGEYPRAISECSLALEVSPRYSKALLRRAKCYVALNRLDLATRDVKFVLSIEPNNVTALEILNNVKNTMEEKGITFDEIEISLPPVQQGPTDRLREVVKEKIKKKKGKKNEKADDKVVVEENPNDVQDKVVVTKMMEEEKKVVEPVKEENVVTRFIKLVLGEDIRWAQLPANSSMGSLRHIIKDRFPGLKGMLIKYRDQEGDLVTITSTADVRLAESSADIQGSLRLYITEVNPDKEPAYEEAPKEEARGTDDKRASNVCEDRDVWSGKEVATGLTTVEDWILQFARLFKNHVGFDSDSYLDLHEQGMKLYSEAMEDTITSDDAQELFDVAAAKFQEMAALALFNWGNVHMSRARKWCLFPEDVDLGSDLEPIKAAYEWAQKEYMMAKRKYEEALTIKPDFYDGFLALGHQQFEQAKLSWYYALANKKDLEIEDGSAEEVLELYNKAEDSMENGMLMWEEMEEKRPNGVPTLHRSKSQLENMGLNGLSKDISPNETSERASNMRSQIFLLWGTLLYERSIVECKLGLPTWPECLEVAVEKFELAGASPTDVAVMMKNHCSNETALDGFKVDEIVQAWHEMNNVQRWQFGVPAFRLEPLFRRRVPRLHHIMERFSVLS* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01150 718 Gene3D Tetratricopeptide repeat domain 40 181 IPR011990 GO:0005515
Pte3g01150 718 SUPERFAMILY CAD & PB1 domains 251 342 - -
Pte3g01150 718 SMART tpr_5 123 156 IPR019734 GO:0005515
Pte3g01150 718 SMART tpr_5 49 82 IPR019734 GO:0005515
Pte3g01150 718 SMART tpr_5 87 122 IPR019734 GO:0005515
Pte3g01150 718 SMART tpr_5 469 502 IPR019734 GO:0005515
Pte3g01150 718 MobiDBLite consensus disorder prediction 337 357 - -
Pte3g01150 718 SUPERFAMILY TPR-like 38 170 IPR011990 GO:0005515
Pte3g01150 718 ProSiteProfiles TPR repeat profile. 49 82 IPR019734 GO:0005515
Pte3g01150 718 PANTHER PROTEIN CLMP1 1 712 IPR044517 -
Pte3g01150 718 SMART PB1_new 254 333 IPR000270 GO:0005515
Pte3g01150 718 MobiDBLite consensus disorder prediction 1 36 - -
Pte3g01150 718 CDD PB1 262 330 - -
Pte3g01150 718 ProSiteProfiles PB1 domain profile. 254 333 IPR000270 GO:0005515
Pte3g01150 718 Pfam PB1 domain 257 331 IPR000270 GO:0005515
Pte3g01150 718 Gene3D - 254 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01150 Pte-Chr3 9815063 9818755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01150 37 156 Calmodulin-binding Proteins AT3G25230 31.783 1.56e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01150 K26538 - qsa:O6P43_015720 936.791