Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01128 ATGAGAGAAACTGGGTGGGGTTGTCTGCATATCGTTGGCTTTATAGGGTGGCTAGCCATAATTTTTCTTTCTTCAGAAAAATGTTTTGCTGGCGTTACCAGTGTTGGAAAGATCTATCCAGGGTATCAAGGATCTCAAATGAACTGGATTGATAAGCAAGGGTTCTTCCTTGAATCAAACCGCTCGGAGTTTGCTTTTGGCTTCACCACCGCAAATAATGTCACCTCTTTTCTGCTGGCCATCCTGCACGTCGACAGTTCAACAGTGATATGGTCAGCAAATAGAGGATCTCCGGTGAGCAATTCTGATAATTTTGAGTTTGATGTCAAGGGCAATGCATTTTTAAAACGAGGACAGAGTGTTGTATGGTCCACGGAGACCAGAGGCAAAGGAGTCTCTGTCATGGAACTTCGAGACGATGGAAATCTGGTTTTGCTTGGTACTGATAGTAAAATAAAATGGCAGAGTTTTGATCATCCCACTGATACCTTGTTACCGAACCAGAGTTTAGTGAAAGGGATGAAGCTTATAAGTGCCGTAGACAACAATAACTTGACCTATATTCTTGAGATTTCATCTGGAGACATGGTTCTGTCTGCAGGTTCTCAAATTCCACAGCCTTATTGGTCTATACAGAAAGATAACCGTAGAACCATTAACAAACATGGAGGGACAGTAGCTTCTGCATCGATTGCTGCTAATTCATGGAGATTCTATGATCAAAGCAACAGCCTGTTGTGGCAATTTATTTTTGCCGATGGCAATGATACTAATGCCACGTGGATTGCTGTTCTGGGACGAGAAGGATTTATTTCTTTCTTCAACCTGAAAAGTGGAAAATCAAGCCCTCCGTCCTCAACTAAAATACCAGATGACGCTTGCAGCACACCGGAACCTTGTGGAGCTTATTACATTTGTTCAAGTGGGAGAAGGTGCCAATGCCCTTCAGTTCTCAACTCTCAAAATTGCAATCCGGGTTTGGTCTCTCCGTGCGGTCAATCCAAAGATTCCACAGAGCTTGTAAGTGTTGGGGATGGGATCGGATACTTTGCACTGGGGTTTCTTCCTCCCTCTTCCAGAACTAATCTGAATGATTGCAAAGCTTCTTGTCTTGGAAACTGCTCATGTCTTGCCATGTTCTTCAACAACAGTACAGGAAATTGTTTCTTATTGGATAGCGTGGGAAGTTTTACAAGTTCTGGTAGGAGCAGCTCTGATGCTCTCTCTTCTTATATCAAGGTCTTAAGTGGTGGAGGGGGAGGCACGGTCACAGGAGAAATAGGAAGCAGCAACAAACATTTCCAAGTTGTGATCATCATTATTGTGCCGACTGCACTGGTCATCTGCTGTCTTCTTTATGGAGGATACCATTACTACAAGAAGAAAAAAAGGTTGCAGGGATCTCCTCGAGAAAGTTCAGAAGAGGATAATTTCTTGGAGAATTTATCTGGAATGCCGGTTCGATTCAGTTACAAAGATCTACAGAATGCAACTAATAATTTCTCAGTTAAGCTGGGTCAAGGTGGCTTTGGCTCAGTTTATCAAGGAGCTCTCCCTGATGGATCAAGAATAGCTGTAAAGAAATTAGAAGGCATTGGACAAGGAAAGAAGGAGTTTCGAGCTGAAGTTAGCATCATTGGCAGCATTCATCATGTCCATTTGGTCAGGCTGAAAGGTTTCTGTGCTGAAGGATCTCATAGACTTCTTGCTTATGAGTACATGAAGAATGGCTCTTTGGATAAATGGATATTCAGGAAGAGCAAAGATGAGGTACTGTTAGATTGGGATACAAGGTTCAACATTGCTTGGGAAACTGCAAAAGGCTTAGCTTACCTCCATGAAGACTGTGATGCAAAAATTATTCATTGTGACATAAAACCTGAAAATGTCCTTCTTGATGACAAATTCGTTGCTAAAGTTTCAGACTTTGGTTTGGCCAAGCTCATGAACAGAGAGCAAAGCCATGTTTTCACAACACTAAGAGGGACAAGGGGCTATTTAGCACCCGAATGGATCACAAATTATGCTATATCAGAAAAGAGTGATGTTTACAGTTACGGGATGGTTTTGCTTGAGATAATTGGAGGAAGGAAAAACTTTGACCCTAGGGTAACCTCAGAGAAATCCCATTTTCCTTCTTATGCTTTTAGGATGATGGAAGAAGGGAAAGTGGAAGATATCCTCGATTCAAAGCTGGAAATAGATGACGACGATCCAAGAGTTCATCTTGCTGTGAGAGTTGCATTGTGGTGCATACAGGAAGATATGTCTCTCAGGCCATCCATGTCAAGAGTGGTTCAAATGCTAGAAGGTCTCTGTCATGTTCCTCCCCCACCCACTTCTTCTGTCCTAGGTAATCGTCTTTATTCAGGCTTATTCAAATCAATAAGTGAAGAGGGTACTTCCTCTGGGCCATCCGATTGCAACAGTGATACTTATCTTTCTGCTGTGCGGCTCTCAGGACCAAGATGA 2472 0.4256 MRETGWGCLHIVGFIGWLAIIFLSSEKCFAGVTSVGKIYPGYQGSQMNWIDKQGFFLESNRSEFAFGFTTANNVTSFLLAILHVDSSTVIWSANRGSPVSNSDNFEFDVKGNAFLKRGQSVVWSTETRGKGVSVMELRDDGNLVLLGTDSKIKWQSFDHPTDTLLPNQSLVKGMKLISAVDNNNLTYILEISSGDMVLSAGSQIPQPYWSIQKDNRRTINKHGGTVASASIAANSWRFYDQSNSLLWQFIFADGNDTNATWIAVLGREGFISFFNLKSGKSSPPSSTKIPDDACSTPEPCGAYYICSSGRRCQCPSVLNSQNCNPGLVSPCGQSKDSTELVSVGDGIGYFALGFLPPSSRTNLNDCKASCLGNCSCLAMFFNNSTGNCFLLDSVGSFTSSGRSSSDALSSYIKVLSGGGGGTVTGEIGSSNKHFQVVIIIIVPTALVICCLLYGGYHYYKKKKRLQGSPRESSEEDNFLENLSGMPVRFSYKDLQNATNNFSVKLGQGGFGSVYQGALPDGSRIAVKKLEGIGQGKKEFRAEVSIIGSIHHVHLVRLKGFCAEGSHRLLAYEYMKNGSLDKWIFRKSKDEVLLDWDTRFNIAWETAKGLAYLHEDCDAKIIHCDIKPENVLLDDKFVAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPRVTSEKSHFPSYAFRMMEEGKVEDILDSKLEIDDDDPRVHLAVRVALWCIQEDMSLRPSMSRVVQMLEGLCHVPPPPTSSVLGNRLYSGLFKSISEEGTSSGPSDCNSDTYLSAVRLSGPR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01128 823 CDD B_lectin 50 160 IPR001480 -
Pte3g01128 823 FunFam serine/threonine-protein kinase PBS1-like 468 573 - -
Pte3g01128 823 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 85 345 IPR011047 -
Pte3g01128 823 ProSitePatterns Protein kinases ATP-binding region signature. 505 528 IPR017441 GO:0005524
Pte3g01128 823 SMART blect_4 48 160 IPR001480 -
Pte3g01128 823 SUPERFAMILY Protein kinase-like (PK-like) 479 771 IPR011009 -
Pte3g01128 823 Gene3D Transferase(Phosphotransferase) domain 1 574 775 - -
Pte3g01128 823 FunFam S-receptor-like kinase 5 574 778 - -
Pte3g01128 823 Gene3D - 48 159 IPR036426 -
Pte3g01128 823 Gene3D Phosphorylase Kinase; domain 1 462 573 - -
Pte3g01128 823 ProSiteProfiles PAN/Apple domain profile. 331 415 IPR003609 -
Pte3g01128 823 PIRSF SRK 13 819 IPR024171 GO:0004674
Pte3g01128 823 Pfam Protein kinase domain 503 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01128 823 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 48 780 - -
Pte3g01128 823 SMART serkin_6 499 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01128 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Pte3g01128 823 ProSiteProfiles Bulb-type lectin domain profile. 41 158 IPR001480 -
Pte3g01128 823 FunFam Serine/threonine-protein kinase 44 158 - -
Pte3g01128 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 178 IPR036426 -
Pte3g01128 823 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01128 823 CDD PAN_AP_plant 331 390 - -
Pte3g01128 823 Pfam D-mannose binding lectin 88 171 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01128 Pte-Chr3 9631496 9634260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01128 431 781 Receptor kinase-like Gene Family AT5G20050 44.324 7.94e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pte3g01128 Pkinase 7.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01128 - - jre:108985155 1186.4