Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01117 ATGCAGGAACAGGCAACCAGTTCACTCGCGGCAAGTTCACTGCCTTCTAGCAGTGAAAGATCTTCGAGCTCCGATCTGCTAGTCGAAGTTAAAGAAGGAATGGAGAGTGATGAGGAAATCAGGAGAGTGCCGGAATTTGGTGGCGAGTCCGCCGGAACATCTGCTTCCCGCAGAGACGCCGGTTTAGTGACCGGTCCAGTTCGGGCTCCATCCACAGCGGAGGGTCAGAGGAAGAGAGGAAGAAACCCCGCTGACAAAGAAAGCAAGAGGTTAAAGAGGTTGCTAAGAAACAGAGTTTCAGCGCAGCAAGCAAGGGAAAGAAAGAAAGCGTATTTGATTGACTTGGAAGCAAGAGTTAAAGACTTGGAGAACAAGAATTCTGAGCTTGTAGAGAAGCTCTCGACTTTGCAGAATGAGAATCAGATGCTTAGACACGTATGCCCTTTTCCTTTGCTATCTTTAATCTCTATTATATTCCCATCCCTCATTCTTTTTACGGTATGCATGCACTTCCATGAATCCCATTTCTTAAATTTTTCTTTTGACCACCGAACATTAATATGCACCCCGTTCCCTCAAGATACAATCCTTTGA 594 0.4596 MQEQATSSLAASSLPSSSERSSSSDLLVEVKEGMESDEEIRRVPEFGGESAGTSASRRDAGLVTGPVRAPSTAEGQRKRGRNPADKESKRLKRLLRNRVSAQQARERKKAYLIDLEARVKDLENKNSELVEKLSTLQNENQMLRHVCPFPLLSLISIIFPSLILFTVCMHFHESHFLNFSFDHRTLICTPFPQDTIL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01117 197 FunFam Transcription factor HY5 108 148 - -
Pte3g01117 197 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 92 107 IPR004827 GO:0003700|GO:0006355
Pte3g01117 197 Gene3D Single helix bin 108 147 - -
Pte3g01117 197 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 144 IPR004827 GO:0003700|GO:0006355
Pte3g01117 197 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 4 144 IPR044280 GO:0000981|GO:0045944
Pte3g01117 197 CDD bZIP_HY5-like 90 141 - -
Pte3g01117 197 Pfam bZIP transcription factor 86 144 IPR004827 GO:0003700|GO:0006355
Pte3g01117 197 Coils Coil 84 146 - -
Pte3g01117 197 MobiDBLite consensus disorder prediction 1 24 - -
Pte3g01117 197 MobiDBLite consensus disorder prediction 30 45 - -
Pte3g01117 197 MobiDBLite consensus disorder prediction 74 89 - -
Pte3g01117 197 SUPERFAMILY Leucine zipper domain 89 145 IPR046347 GO:0003700|GO:0006355
Pte3g01117 197 SMART brlzneu 85 149 IPR004827 GO:0003700|GO:0006355
Pte3g01117 197 MobiDBLite consensus disorder prediction 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01117 Pte-Chr3 9547914 9550773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01117 1 177 bZIP Transcription Factor Family AT5G11260 67.416 6.99e-60 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte3g01117 bZIP_1 8.1e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01117 K16241 - zju:107421189 215.698