Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01113 ATGGATTCTTCTGAACCACTTGCAGACAACATTGCTAGTACTCCTGTAAATACCAAAGCTAAGACTAAGACTAAGACAACTGCTGCTATCGCCGCTACTGCAGCCACTGCATCTATACCGGACTCTCCTCAAGTACAGGAATCTCCTTTCTTCAGTTACGTGAACAATCTCTCTCCAATAGAGCCTGTCAAAGCTGCTCATAATATTGCTCAAGGATTCCCTGGACTGAATTCCCCACCTCTTGTCTTCGCTTCTCCACGCATTATTTCTCATAGAGAAGCAAGTTTCTTGAAAAGGTCTAGATCACCCATTCAACAGAATTCTCATGATGACATTAAGGGCAAGAATGTTGTCTGTGACCAAGCTATTTCCTATAGAATAAGTTCTTCACCATCCCGAGGATTGGTGGCTGATGTTCACAATGAGGGTGAAATCAAGGACTACGCAAACACTGAACCCTGCAATTCACCAGGATGTGTTGATCAATATCTGGCTGATCCTGTGGAGGTTGACTGTGAGGATTCAGTGCCTTCAGCTGACATGGACATAAAACAGTCCAGTGACATTCAAAGACCATCACAGGGTAACTTAACTGACCTGAAGGATTCTGAATTGGAATCTGAAGAGGGACAGGAACAAGCCGAAGGGCATCTGAATATTTCACGTCAATCCCAAATGAAGCTTGTAGAGACAACAAGCAGTGCTGGTTCTTGCAGAAACAAAGGAGAGCATAAGCATGTTGACTGTCTTTCTAGTGAATGCCCAAGTACTGGATCTAGTTTGCCTGCAGACTTTGATTCTCATGTGCGACAAGACGAATGCCCATTAATCCCGAATGCAGAAAGTGAAGATGGGGGCTATCATGACAATCATCTTCTATCAGTATCTGAACTTTCACATCATGTTCAGGATCACGACTGTCCTGGTCAGAATAAGGATAATGCTTCATATGCAAGCATAGAGAATGTGATGTCAGATGATTCAGAGGCCTGCCAAAAGCATCGTGGATTGCTTAGACGTTGCCTTCAATTTGAGGAGGAAACAACCGGTGCTTCTCGAAGCTTCAGCTCTACGCATGCTACACATAATGTAATTAAGTTAAACTTGCCAGCCCCTGTGGCGGAACCAACTATGCCACAAAACTCTCATGTGACCCAGAGTTCATCTTTAATGAAGATGCAACTGATAAAGCTTTCCCAATCCAAGAATTCCTCAGCGAGTCCCCTATGGAGTGGAAACACTCCATTTACTGGCTCCAAGCAGTTGGGCTTTGGCTTGCATTTGAATAGTATTGTATCTTCTATGCCAATTGATTCTGATGCGACTGCCTGTATGAGACAAACAGAGGACTATCTGAGTGTGCAGGAGCTAAATTCAAAACCCCATACAAACAGTCACGTTTTGGACAATCTGAAGAGATGCTCACATGAAAATGAAATACCTGATCAGGAACATGAAACAAATGTATCAAACTTAGCAAATTTAGAGAACGTCAAGTCTTTTCCTTCCAAGGAGCATTTAAGCATACCGAGCTCTGGTGAGCAACCAGCAAGCAACCTTGATAAGAGAAAGCTTAACCAGGAATCTGCAGAGAGTTCTCAGCAGTTCAACCAATCAAGCCCCAAAAAAAAGAAGAAGAAAACAGCTGGCTCCAATGAAAATGATGGTTGTAAGCGCTGTAACTGTAAGAAGAGTAAATGCTTGAAACTCTACTGTGACTGTTTTGCTGCTGGAATCTACTGTTCTGAACCTTGTGCTTGCCAAGGTTGCCTCAACAGACTTGAGTATGAAGACACGGTTCATGAGGCTAAGCAACTAATTGAATCACGCAATCCACTTGCTTTTGCTCCAAAAGTAGTACCGAATGTTCCCGAGTTTCCAACAGTCAATGGGGAAGATGGAAATCTAATGACACCATCCTCTGCAAGGCATAAGAGAGGTTGCAATTGCAAAAAATCCATGTGTCTGAAGAAGTATTGTGAATGTTATCAGTCAAATGTTGGGTGCTCTCTTGGATGCCGATGTGAAGGGTGCAAAAATGTTTATGGCAGGAAAGAAGAATATCTTCCGATTGAACGTGGTTTGAACAAAGAAGTCATGAACAGTAGGGTTCTTGATGAAAGATCTTGCCGGTTATTTCATGGTAAACTAGAAGGAGGTGCTCGCAGCATCTTGAATGCTGAGTTTTATGATCTTCAGAACCTCACACCTTTAACTCCAGCTATACAGTACTCAGACCATGGAAAGGATGCCTTAAAATCTCAGCTTCTTTCTGGACAACATCTAACACCAACTGAATCGGATGTTAGCAGTCTCTCATCTAGTGGAGAATTCACAAAATTTTTGAAGCATTCCCAGAGTGTTGATGTGCTTCACGAATCAAGGAAGGAGATAATAGATGCAGATTCCTTTAATTGGCAAATTGATCATGACAATACTGAAACGAGAAATCAATTGGTGGATAGAGATGCTGCAGTTAATAATGCCTGCCAACCTACAGCGATCTCAGATATTTCATCACTGGATGATGCTTCAATTTCATCCAAAAGAAATGATTTGTCCCATTTATCTCAAATTCAGCTCTCCCATGGTAGTGGTGGCCTCTTGTCTGGTAGTTCACTTCGTTGGCACAGTTCGCCAATGACCCCAATGGGTCGATTAGCTGAGACCAAGTATTTAGAGTATTCAGATTCTGCCAGTAAACTCCATGACATACCAGAAGATGATACACCTGAGGTATTGAAAGACACATCAACTCCTGTCAAATCTGTAAAAGCAAGTTCTCCAAATCAGAAACGTGTTTCCCCTCCACATAATCATGCTCGTGCGATTGGTTCAAGTTCTTCTGGTGGCTTAAAAAGCGGTCGAAAATTCATTTTGAAGGCCGTGCCCTCTTTTCCACCGTTAACCCCTCACATTGATTCCAAAGGCATGGCTAATAAGAATGCTGCAAGTCAAAATGCGGATGGGAAATGA 2976 0.4257 MDSSEPLADNIASTPVNTKAKTKTKTTAAIAATAATASIPDSPQVQESPFFSYVNNLSPIEPVKAAHNIAQGFPGLNSPPLVFASPRIISHREASFLKRSRSPIQQNSHDDIKGKNVVCDQAISYRISSSPSRGLVADVHNEGEIKDYANTEPCNSPGCVDQYLADPVEVDCEDSVPSADMDIKQSSDIQRPSQGNLTDLKDSELESEEGQEQAEGHLNISRQSQMKLVETTSSAGSCRNKGEHKHVDCLSSECPSTGSSLPADFDSHVRQDECPLIPNAESEDGGYHDNHLLSVSELSHHVQDHDCPGQNKDNASYASIENVMSDDSEACQKHRGLLRRCLQFEEETTGASRSFSSTHATHNVIKLNLPAPVAEPTMPQNSHVTQSSSLMKMQLIKLSQSKNSSASPLWSGNTPFTGSKQLGFGLHLNSIVSSMPIDSDATACMRQTEDYLSVQELNSKPHTNSHVLDNLKRCSHENEIPDQEHETNVSNLANLENVKSFPSKEHLSIPSSGEQPASNLDKRKLNQESAESSQQFNQSSPKKKKKKTAGSNENDGCKRCNCKKSKCLKLYCDCFAAGIYCSEPCACQGCLNRLEYEDTVHEAKQLIESRNPLAFAPKVVPNVPEFPTVNGEDGNLMTPSSARHKRGCNCKKSMCLKKYCECYQSNVGCSLGCRCEGCKNVYGRKEEYLPIERGLNKEVMNSRVLDERSCRLFHGKLEGGARSILNAEFYDLQNLTPLTPAIQYSDHGKDALKSQLLSGQHLTPTESDVSSLSSSGEFTKFLKHSQSVDVLHESRKEIIDADSFNWQIDHDNTETRNQLVDRDAAVNNACQPTAISDISSLDDASISSKRNDLSHLSQIQLSHGSGGLLSGSSLRWHSSPMTPMGRLAETKYLEYSDSASKLHDIPEDDTPEVLKDTSTPVKSVKASSPNQKRVSPPHNHARAIGSSSSGGLKSGRKFILKAVPSFPPLTPHIDSKGMANKNAASQNADGK* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01113 991 MobiDBLite consensus disorder prediction 902 991 - -
Pte3g01113 991 MobiDBLite consensus disorder prediction 180 200 - -
Pte3g01113 991 MobiDBLite consensus disorder prediction 504 539 - -
Pte3g01113 991 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 646 680 IPR005172 -
Pte3g01113 991 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 558 593 IPR005172 -
Pte3g01113 991 MobiDBLite consensus disorder prediction 179 224 - -
Pte3g01113 991 MobiDBLite consensus disorder prediction 916 953 - -
Pte3g01113 991 MobiDBLite consensus disorder prediction 1 27 - -
Pte3g01113 991 SMART CXC_2 643 684 IPR033467 -
Pte3g01113 991 SMART CXC_2 555 596 IPR033467 -
Pte3g01113 991 ProSiteProfiles CRC domain profile. 556 683 IPR005172 -
Pte3g01113 991 MobiDBLite consensus disorder prediction 503 555 - -
Pte3g01113 991 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 35 976 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01113 Pte-Chr3 9514741 9520833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01113 540 689 CPP Transcription Factor Family AT3G22760 65.563 2.60e-59 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pte3g01113 TCR 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01113 K21776 - qsa:O6P43_019426 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01113 3 9514741 9520833 Pte3g01113 3 9514741 9520833 RCT