Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01111 ATGAGTTCCATATACAACTCATCTTATGCTCTTCCTCCCAACCTTAGATGGGATGATGCGAGCCCCGAGTGGATGAACAAAGGTGACAACGCATGGCAGCTAACTGCTGCAACCTTAGTTGCTATGCAAAGTGTTCCAGGGCTCGTAATCCTCTACGGCGGTGCAGTGAAGAAGAAATGGGCTGTAAATTCAGCGTTCATGGCTCTCTATGCTTTTGCTTCAGTTCTAGTTTGTTGGGTTTTGTGGGGCTACAAGATGTCCTTTGGGAACGAGCTTGTTCCATTTTGGGGAAAAGCTGCTTTGACAACACTAGACCAGAAGTTTCTTCTTGAACCTGCATTTTCTGGAAAATTTCCTAACGCCACAATGGTGTATTTTCAGTTCGGCTTTGCTGCTATGACTTTAATTCTCATAGCTGGGGCTTTGTTAGGTCGCATGAATTTCTTGGCTTGGATGATATTTGTGCCCCTCTGGCTAACCTTCTCCTACACCTTCGGAGCATTTAGCATATGGAGTCTCAATGGCTTCTTGTTCAAGAAAGGACTAATTGATTACTCCGGTGGCTATGTGATACATGTTTCTTCGGGAGTTGCAGGATTCACAGCAGCATACTGGGTTGGCCCTCGGTTGAACAAGGACAGAGAAAGGTTTCCTCCAAACAACATTCTTCTCATGTTAGCCGGAGCAGGAATGCTTTGGATAGGTTGGACTGGCTTCAATGGAGGAGACCCTTACGTTGTAAGCACTGATGCTTCCTTGGCTGTGATGAACACGCACATATGCACAGCTACTAGCCTGCTTACATGGCTCATGCTTGATGTGACATTTTTCGGCAAACCATCGGTCATCGGAGCAGTTCAAGGCATGATTACTGGGTTAGTTTGCATTACCCCAGCAGCTGGCGTGGTACAAGCATGGGCAGCAATTCTAATGGGGCTGTGCTCTGGTTCCATTCCTTGGTTCTCCATGATGGTTGTCCACAAGAAATCAAAGCTGCTTCAACAAGTTGACGACACAATGGCTGTTTTTCACACTCATGCAGTAGCTGGGACTCTTGGGGGTTTGCTGACAGGTCTATTCGCAGAGCCAAAGCTCTGCTATCTGTTCTACAATGGATACAATCAATACATTGGATTGTTCTACAGCTTTCAAATGGGACTTCCCAAGACAGGGTTTAGGCAGGTGGCGATTCAGATTCTTGGCATATTGTTTATAGCAGTACTCAATGTGTTTAGCACAAGCTTGATATGCTTCCTTGTACAACTTGTGGTTCCACTGAGAATGTCAGATGAGGATATGGAGATTGGTGATGAGGCAGCACATGGGGAAGAAGCCTATGCTATTTGGGGTCAAGGTGACAAGCTTGAGAGTAATACTGGTCGGAAGTATGGTAATTCGCCACGTGATGACATTGAATCTGCCTTGTCCAGCAAAAAAGATTCTATCCGTCAAATAGAGATGACATCAAACTGA 1473 0.4562 MSSIYNSSYALPPNLRWDDASPEWMNKGDNAWQLTAATLVAMQSVPGLVILYGGAVKKKWAVNSAFMALYAFASVLVCWVLWGYKMSFGNELVPFWGKAALTTLDQKFLLEPAFSGKFPNATMVYFQFGFAAMTLILIAGALLGRMNFLAWMIFVPLWLTFSYTFGAFSIWSLNGFLFKKGLIDYSGGYVIHVSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGMLWIGWTGFNGGDPYVVSTDASLAVMNTHICTATSLLTWLMLDVTFFGKPSVIGAVQGMITGLVCITPAAGVVQAWAAILMGLCSGSIPWFSMMVVHKKSKLLQQVDDTMAVFHTHAVAGTLGGLLTGLFAEPKLCYLFYNGYNQYIGLFYSFQMGLPKTGFRQVAIQILGILFIAVLNVFSTSLICFLVQLVVPLRMSDEDMEIGDEAAHGEEAYAIWGQGDKLESNTGRKYGNSPRDDIESALSSKKDSIRQIEMTSN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01111 490 MobiDBLite consensus disorder prediction 463 479 - -
Pte3g01111 490 Pfam Ammonium Transporter Family 31 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pte3g01111 490 MobiDBLite consensus disorder prediction 458 490 - -
Pte3g01111 490 NCBIfam ammonium transporter 29 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pte3g01111 490 PANTHER AMMONIUM TRANSPORTER MEP2 16 457 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pte3g01111 490 FunFam Ammonium transporter 14 449 - -
Pte3g01111 490 SUPERFAMILY Ammonium transporter 24 428 - -
Pte3g01111 490 ProSitePatterns Ammonium transporters signature. 184 209 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pte3g01111 490 Gene3D Ammonium transporter AmtB like domains 13 450 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01111 Pte-Chr3 9506204 9508032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01111 121 487 Inorganic Solute Cotransporters AT2G38290 59.401 3.39e-145 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01111 K03320 - twl:119984133 758.059