Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01107 ATGGAGAGCATTCGCGCTCCATTCGAGGGGATAATCAAAGATTTAAAAGGAAGGAAAGTATGGCTTGCAGACGATTGGACGCGGGGATTCTGTTCAGGTGTTAGCATATTGGCTCCCATTTTCTATATCTTCTTTGCTTCTGCTCTTCCAGTTATTGCATTCGGGGAGCAGCTATCTAGAGACACAGATGGAACCTTGGGCACAGTTGAAACATTGGTATCGACTGCTCTATGCGGAATCTTACACTCCATTTTTGGCGGCCAGCCTTTGTTGATTCTTGGCGTTGCTGAACCGACAGTGATAATGTACACATACCTTTACAACTTCAGCAAAGGAAGGCCAGAACTTGGTAAAGATCTGTTCTTGGCTTGGGCTGGATGGTATGGATCAGTACTACGTTTGTTTGAGGGTTTTATACTAATTGAGTTAAACTCCAGTTTACATATAATGTTCATCTTGAATCACTGTTGCAGGGTCTGTGTTTGGACGTCCTTGATGCTCTGTGTGCTTGCAATTTTCAACGCGTGCAAAATTATCAGTAGATTTACAAGAATCGCAGGGGAAATGTTTGGCATGTTGATCGCTGTTCTTTTCACGCAAGAGGCTATCGTGGGACTGATCAGTGAGTTCAAGATTCCAAAGGGAGAAAACGAATCACTTGAAAAGTTCCAATTCCAATGGAGATATATAAATGGTTTAACTGCTGTGATTTTCGCTTTTGGTCTACTGCTCACCGCCTTGAAGAGCACAAGAGCAAGAGCATGGCGATATGGATTTGGGTGGCTAAGAAGTTTTATTGCAGACTATGGAGTTCCCCTTATGGTTTTGGTATGGACTGCCTTGTCATATGCAGTACCTGCGAATAAGGTTCCTGATGATGTCCCCAGAAGGCTTACAATGCCACTTCTCTGGGATCCTGCTTCTGTTTACCATTGGACTGTGATCAAGGACATGAGCAAGGTCCCAGTGGCTTATATTTTTGCAGCAATTATACCAGCCATAATGGTGGCAGGTTTATACTTCTTTGATCACAGTGTGGCGTCACAAATGGCTCAGCAGAAGGAATTTAATCTCAGAAAACCATCTGCCTACCATTACGATATGCTGCTGCTCGGAATAATGACTCTTATTTGTGGGTTACTCGGCATTCCTCCAGCAAATGGTGTCCTGCCACAATCTCCCATGCACACAAAGAGTCTCATAACTCTGAATAAGCAGTTGATCAGAAAGAAGATGGTTAAGAGGGCAAAGGAATGCATCAGAGCACAAGAGAGTACCTCAGAGATGTATGGAAAGATGCAAGACGTATATGATGAAATGGGCACGAAACCGACTGTGAGTAGTACTACTGCGAAAGAGTTGGCGAATTTGAAGGAGGCTGTAGTGAAATCCAATGATGGGGGTGATAACAAGGGAAATTTTGATCCTGAACAATCCATTGAACCCTATCTACCTGTCCGGGTTAATGAGCAAAGAGCTAGCAACCTTGTCCAGTCTCTGCTTGTAGCTCTTTCTCTACTTCTTATCCCCATAATGAGAAGAATACCAACCTCAGTTCTCTGGGGATATTTCGCCTATATGGCAATAGATAGTCTTCAAGGAAATCAGTTTTGGGAGAGATTCTTGCTTCTCTTCATCATTCCAAAGAGGAGATTCAAGGTTTTGGAAGAATCTCATGGTTCATATGTGGAGTCAGTACCTTTCAAGACCATTGCCTTTTTTACGCTATTTCAGTTTGTGTATTTTCTGCTTTGCTTTGGTATAACAAAGATACCCATAGCCGGGATATTGTTCCCTGTGCCATTCTTCGTTCTCATTGTCATAAGAGAACATTTGCTTCCGAAGCTGTTTCAACCTGAACATCTTCAAGAACTAGATGCTTCTGAGTATGAGGAGATTGAGGGTGCTCCACATAGCTATCTACAAATGTCGGACGAAACACCAGCAAACGCAGATGATTCAGGGAGCTCACCAGAAGTGTTTGAAGATGCTGAGCTATTGGATGAGATGACAACCCGAAGAGGAGAAATCAAACTAACAAGCAAGAGCCTGAGAAACCGAAATTCCAACAACGAGAGGCACTTTCAGGTAAATTCATTTTTGGAGGATCCAAGCACTCCTGTTTATACGAAGGGATGTCAACGATGGAAATTTAATACTGAATTCCGATCGAAAAAAGGATTGATAGCAAATGGCGATTTCGAGCTTGGGCCAAAGCAGGAAGACTTGAATGGGACGGCTGTGAAAGGCAACCATGCTATACCAGAGTGGGAAACATCTGGCTTCGTTGAGTACATAAAATCTGGGCAGAAGCAAGGAGATATGTTGCTGGTGGTATCAGAAGGAGCATAA 2352 0.432 MESIRAPFEGIIKDLKGRKVWLADDWTRGFCSGVSILAPIFYIFFASALPVIAFGEQLSRDTDGTLGTVETLVSTALCGILHSIFGGQPLLILGVAEPTVIMYTYLYNFSKGRPELGKDLFLAWAGWYGSVLRLFEGFILIELNSSLHIMFILNHCCRVCVWTSLMLCVLAIFNACKIISRFTRIAGEMFGMLIAVLFTQEAIVGLISEFKIPKGENESLEKFQFQWRYINGLTAVIFAFGLLLTALKSTRARAWRYGFGWLRSFIADYGVPLMVLVWTALSYAVPANKVPDDVPRRLTMPLLWDPASVYHWTVIKDMSKVPVAYIFAAIIPAIMVAGLYFFDHSVASQMAQQKEFNLRKPSAYHYDMLLLGIMTLICGLLGIPPANGVLPQSPMHTKSLITLNKQLIRKKMVKRAKECIRAQESTSEMYGKMQDVYDEMGTKPTVSSTTAKELANLKEAVVKSNDGGDNKGNFDPEQSIEPYLPVRVNEQRASNLVQSLLVALSLLLIPIMRRIPTSVLWGYFAYMAIDSLQGNQFWERFLLLFIIPKRRFKVLEESHGSYVESVPFKTIAFFTLFQFVYFLLCFGITKIPIAGILFPVPFFVLIVIREHLLPKLFQPEHLQELDASEYEEIEGAPHSYLQMSDETPANADDSGSSPEVFEDAELLDEMTTRRGEIKLTSKSLRNRNSNNERHFQVNSFLEDPSTPVYTKGCQRWKFNTEFRSKKGLIANGDFELGPKQEDLNGTAVKGNHAIPEWETSGFVEYIKSGQKQGDMLLVVSEGA* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01107 783 Gene3D Helical hairpin bin 18 60 - -
Pte3g01107 783 Pfam Protein of unknown function (DUF642) 727 783 IPR006946 -
Pte3g01107 783 PANTHER ANION EXCHANGE PROTEIN 5 634 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pte3g01107 783 Pfam HCO3- transporter family 486 576 IPR011531 GO:0006820|GO:0016020
Pte3g01107 783 Pfam HCO3- transporter family 7 113 IPR011531 GO:0006820|GO:0016020
Pte3g01107 783 Pfam HCO3- transporter family 139 211 IPR011531 GO:0006820|GO:0016020
Pte3g01107 783 Pfam HCO3- transporter family 233 405 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01107 Pte-Chr3 9467255 9473534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01107 2 694 Antiporters AT5G25430 60.951 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01107 K24194 - cave:132189892 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01107 3 9467255 9473534 Pte3g01107 3 9467255 9473534 RCT