Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01104 ATGACGTTGCTTTTAGGCCCTCCAAGCTCCGGAAAGACCACGTTGCTCCTTGCACTAGTTGGAAAACTGGCGAAAGATTTGAAATTTTCTGGGAGAATTACATACAACGGACAAGGGATGGAAGAGTTCGTACCTCGGAGGACATCTGCCTATATAAGTCAATTTGACCTTCATATTGGAGAAATGACGGTGAGAGAGACATTGGCTTTTTCAGCAAGATGTCAAGGGGTTGGAACCCAATATGAAATGCTTTCAGAATTATCAAGAAGAGAGAAGGAAGCAAATATCAAGCCAGATCCTGATATTGATGTCTATATGAAGGCTGCAGCTTTAGAAGGTCAGGAGACCAGTGTGATTACAGATTATATACTAAAGATTCTGGGACTTGATGTTTGTGCCGATACGATGGTGGGGGATGAAATGATTCGAGGTATTTCTGGTGGTCAGCGGAAAAGATTGACAACTGGTGAGATGCTAGTTGGACCAGCAAGAGCACTATTCATGGATGAAATATCAACTGGTTTAGACAGTTCTACCACATTTCAGATAATTAATTCTCTCAGGCAGTCTATCCACATTCTCAACGGAACTGCACTGATCTCTCTTCTCCAGCCAGCACCAGAAACCTATGAGCTCTTTGATGACATAATTCTCCTTTCAGATGGCCAAATTGTCTACCAGGGCCCTCGTGAAAACATTCTTGAATTCTTCGAACATATGGGGTTCAGATGTCCAGAGAGAAAGGGTGTTGCTGACTTCTTACAAGAAGTGACATCAAGGAAAGATCAAGAACAATACTGGGCAAATAGAGATGTGCCATATACCTTCGTCACCGTCAAAGAATTTGCAGAAGCATTTCAAACATTTCATGGTGGTCGAAAACTCGGGGAGGAGCTGGCTACTCCATTTGACAAGAACAAAGGTCACCCTGCCGCTTTAGCAACTAAAACATATGGAGTTAGCAAGAAGGAGCTATTCAAAGCTTGTGTAGCCAGAGAAATTCTGCTCATGAAGAGGAATAAATTCTTTTACATTTTTAAATTAAATCAATTGTTCATTATAGCCATCATAGCAATGACTCTATTCCTACGAACTGAAATGCATCGGGATACAGTAACAGATGGTGGAATTTTCATGGGTGCTTTATTCTTTACCCTCATCATAACCATGTTCAACGGATTTGCTGAGCTCACACTCACAATCTTGAAGCTTCCTGTCTTTTATAAGCAAAGAGATCTCCTTTTCTTTCCACCTTGGGCATACTCTCTTCCTACATGGATTCTTAAGATTCCAATCACCCTAGGAGAAGTTGGCCTGTGGGTGGCAATAACTTACTATGTCATTGGCTATGATCCAAGCTTTGAAAGGTTTTTGAAACAGTTCCTTATACTTATAGGCGTCAACCAGATGGCCTCTGGATTATTCCGACTAATGGCTGCACTTGGAAGGAACATGATTGTAGCAAATACATTTGGTTCCTTTGCTTTACTTGCAGTTTTGGTATTGGGAGGATTTATCGTATCTAGAGTTGATGTGAAGAAGTGGTGGATATGGGGCTATTGGATGTCGCCTCTGATGTACGCACAGAATGCTATATCTGTGAATGAGTTCCTCGGCAACAGTTGGAGACATGTTCCTCCCAATTCAAATGAATCATTAGGAGTTACGGTCCTCAAGTCACGAGGGGTTTTTCCTCACGCATATTGGTATTGGATAGGATTTGGAGGCCTCATTGGCTTTGTTTTACTATTCAATTTGCTCTTCACGTTGGCCTTGCAGTTCCTTGACCCATTTGGAAAGCCTCAGGCAATTATATCAAAAGAGCCCTCAACTGAGACAAATGCAAACAAAACTCGTGAGGACATTGCGTTGATACCCAGAGAAAGCAGGACTTCTGGAAATGAAGTTGCGGCGTCGTCGGCAAGAATTGGAAGCCTAAGTCAAGCCTCTGATCAGAATAAGAAGCGAGGAATGGTTCTTCCATTTACACCCCTTTCAATAACTTTTGACGATGTCAAATATGCTGTGGACATGCCACAGGAACTTAAAGCCCAAGGTATTCCTGAGGATAGGCTTGAACTGCTCAAGTGTGTCAGTGGTGCATTTAGGCCCGGAGTTCTTACAGCTCTAATGGGTGTAAGTGGAGCTGGGAAAACGACACTGATGGATGTATTAGCTGGAAGGAAAACCGGTGGTTATATTGAGGGTGATGTTAGAATAAATGGGTATCCCAAAAAGCAAGAAACTTTTGCTCGTATATCAGGGTACTGTGAGCAAACTGATATCCACTCTCCTCATGTCACAGTGTACGAGTCCTTGCTTTATTCTGCATGGCTCCGTTTGCCCCCTGAGGTTGATTCTCAAACTAGACTGATGTTTGTCGAAGAAGTAATGGAGCTTGTAGAACTGAATACAATGAGAGAGGCACAAGTTGGGTTACCTGGAGTAAATGGTCTCTCCACTGAGCAGCGCAAGAGACTCACAATTGCAGTTGAACTTGTTGCAAATCCATCTATAATATTCATGGACGAGCCCACCTCTGGTCTCGATGCCCGAGCAGCAGCTATAGTCATGAGAACAGTGAGGAACACGGTTGATACAGGAAGAACTGTGGTCTGTACCATCCACCAGCCCAGCATTGACATATTCGATGCTTTTGATGAGTTATTTCTCTTGAAACGTGGAGGTCAAGAAATATATGTTGGGCCAATTGGTCGACATGGTTATCATTTGATCAATTATTTTGAGGCAATCCGCGGAGTGCAGAAAATCAGAGATGGTTATAATCCTGCAACTTGGATGTTGGAAGTTTCTTCAGCAAAAGAGGAAGCAACTCTTGGGGTTGACTTCGCTGAAATATACAAAAACTCTGATTTGTACAGGAGAAACAAGAATCTAATAAAGGAACTTAGTGCACCCCCATCAGGTTCAAAGGACTTGCACTTCAGTACCAAATACTCGCAGCCATTCCTCACACAATGTAAGGCGTGTCTCTGGAAGCAGCATTTGTCATATTGGAGAAACCCTCCTTACACTGCTGTGAGACTTCTATTCACCACAGTTATAGCCCTTTTGTTTGGTTCTATATTTTGGCAAGTTGGCTCCAAAAGAAAAAGGCAACAAGATGTTTTCAATGCCATGGGATCCATGTATGGTGCTGTTCTTTTCATCGGCATACAAAATGCAACATCCGTACAGCCAGTCGTGGCCATTGAGAGAACAGTCTTCTATAGAGAAAGGGCAGCTGGAATGTACTCTGCATTACCTTATGCCTTTGGACAGGTGGTTATCGAGCTCCCTTATATTTTGTTACAAACAATTGTATATGGAGTCATAGTATATGCCATGATCGGATTTGATTGGACGGCGAAGAAGTTTCTCTTGTACCTGTTCTTTATGTATTTCACATTTTTGTACTTCACCTTTTATGGGATGATGACTGTAGCTGTCACTCCCAATCACAACGTCGCTGCCATAGTTGCCTCTGCCTTCTATGGAATTTGGAATCTATTTTCTGGATTCATCATTCCTAGACCAAGAATGCCAGTTTGGTGGAGATGGTACTTCTGGGCTTGCCCTGTAGCATGGACCTTGTATGGATTGGTTGCCTCACAGTTCGGGGACTTTGAGGATCGTCTTGACGATACACAACAGACTGTGAAAGAATTTATTAGGAGTTATTTTGGGTACAAGACGGATTTTGTAGGTCCCGTGGCAGCTGTGCTTGTTGGGATTTCCGTTTTGTTTGCTTTCATCTTTGCATTTTCCATCAAGTTCTTCAACTTCCAGAAGAGGTGA 3798 0.4268 MTLLLGPPSSGKTTLLLALVGKLAKDLKFSGRITYNGQGMEEFVPRRTSAYISQFDLHIGEMTVRETLAFSARCQGVGTQYEMLSELSRREKEANIKPDPDIDVYMKAAALEGQETSVITDYILKILGLDVCADTMVGDEMIRGISGGQRKRLTTGEMLVGPARALFMDEISTGLDSSTTFQIINSLRQSIHILNGTALISLLQPAPETYELFDDIILLSDGQIVYQGPRENILEFFEHMGFRCPERKGVADFLQEVTSRKDQEQYWANRDVPYTFVTVKEFAEAFQTFHGGRKLGEELATPFDKNKGHPAALATKTYGVSKKELFKACVAREILLMKRNKFFYIFKLNQLFIIAIIAMTLFLRTEMHRDTVTDGGIFMGALFFTLIITMFNGFAELTLTILKLPVFYKQRDLLFFPPWAYSLPTWILKIPITLGEVGLWVAITYYVIGYDPSFERFLKQFLILIGVNQMASGLFRLMAALGRNMIVANTFGSFALLAVLVLGGFIVSRVDVKKWWIWGYWMSPLMYAQNAISVNEFLGNSWRHVPPNSNESLGVTVLKSRGVFPHAYWYWIGFGGLIGFVLLFNLLFTLALQFLDPFGKPQAIISKEPSTETNANKTREDIALIPRESRTSGNEVAASSARIGSLSQASDQNKKRGMVLPFTPLSITFDDVKYAVDMPQELKAQGIPEDRLELLKCVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRINGYPKKQETFARISGYCEQTDIHSPHVTVYESLLYSAWLRLPPEVDSQTRLMFVEEVMELVELNTMREAQVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELFLLKRGGQEIYVGPIGRHGYHLINYFEAIRGVQKIRDGYNPATWMLEVSSAKEEATLGVDFAEIYKNSDLYRRNKNLIKELSAPPSGSKDLHFSTKYSQPFLTQCKACLWKQHLSYWRNPPYTAVRLLFTTVIALLFGSIFWQVGSKRKRQQDVFNAMGSMYGAVLFIGIQNATSVQPVVAIERTVFYRERAAGMYSALPYAFGQVVIELPYILLQTIVYGVIVYAMIGFDWTAKKFLLYLFFMYFTFLYFTFYGMMTVAVTPNHNVAAIVASAFYGIWNLFSGFIIPRPRMPVWWRWYFWACPVAWTLYGLVASQFGDFEDRLDDTQQTVKEFIRSYFGYKTDFVGPVAAVLVGISVLFAFIFAFSIKFFNFQKR* 1266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01104 1265 SMART AAA_5 1 230 IPR003593 GO:0016887
Pte3g01104 1265 SMART AAA_5 704 896 IPR003593 GO:0016887
Pte3g01104 1265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 2 246 IPR003439 GO:0005524
Pte3g01104 1265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 667 919 IPR003439 GO:0005524
Pte3g01104 1265 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 1 1265 - -
Pte3g01104 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 246 IPR027417 -
Pte3g01104 1265 Gene3D - 1 279 IPR027417 -
Pte3g01104 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 692 902 IPR027417 -
Pte3g01104 1265 Gene3D - 680 906 IPR027417 -
Pte3g01104 1265 FunFam ABC transporter G family member 34 1 280 - -
Pte3g01104 1265 Pfam ABC-2 type transporter 204 257 IPR043926 GO:0140359
Pte3g01104 1265 FunFam ABC transporter G family member 40 681 911 - -
Pte3g01104 1265 Pfam Plant PDR ABC transporter associated 542 605 IPR013581 -
Pte3g01104 1265 Pfam ABC-2 type transporter 325 537 IPR013525 GO:0016020|GO:0140359
Pte3g01104 1265 Pfam ABC-2 type transporter 992 1206 IPR013525 GO:0016020|GO:0140359
Pte3g01104 1265 CDD ABCG_PDR_domain2 664 902 IPR034003 -
Pte3g01104 1265 Pfam ABC transporter 695 847 IPR003439 GO:0005524
Pte3g01104 1265 Pfam ABC transporter 2 171 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01104 Pte-Chr3 9430196 9437409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01104 692 879 Calmodulin-binding Proteins AT2G36910 26.289 9.38e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01104 K08711 - qsa:O6P43_015652 2051.94