Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01103 ATGATGGAGGAAACTGAAGGGTCAGCTAAAAGTTTTGAAAATGGGAGTTCAAGTGATGGTCGACCTCCCAATCCCCTTGCTGCTGCATATCGCCAATGCTTGAGCACTAACAATCCTGTGGTGGCGCCTTGCAAGAAATCACTCGTTCGGCATCCTTCACTTGTGAAAACAAAGATATCTGATGTCTCGACTGAACATTGTCATGTTTTAGAGGACTGCAAATCTGATTTCCTTCCAATTCTTCGGTCTGGAGCTTGGGCCGATGTTGGTTTCCGTACAAGCATGGAAGATGTTTATGTTTGTGTGGATGATATTAAGCGAGATTATGGGGTCAAGAGTCAGACAAATGGACCAAGTGCTTTTTATGGGGTGTTTGATGGGCATGGAGGAAAGCATGCTGCAGACTTTGCTTGCTTCCATTTGCCGAAGTTCATCATTGAGGATGAAGGTTTTCCGAGAGACATTGAAAGAGTACTTGCTTCAGCTTTTCTCCAGACAGATACTGCCTTTGCACAAGCTTGCTCTCTGGATGCTGCCCTTGCCTCTGGTACAACTGCATTAGCTGCTCTCGTTCTTGGCAGGTCTCTGGTGGTGGCCAATGCTGGAGATTGCCGAGCAGTATTATGTCGCCGGGGAAAAGCAATTGAGATGTCTAGGGATCATAAACCAGGTTGCCTGAAGGAGAGAATGCGCATCGAGGCTTGTGGAGGCTATGTGGACGACGGATATCTTAATGGACAACTTAATGTTGCGCGTGCTCTAGGAGATTGGCACATGGAAGGAATGAAAGGCGGGGACAGTGGACCCCTCAGTGCTGAGCCTGAGCTTATGTCCACTAAACTAACAGAAGAAGATGAATTTCTCATCATTGGATGTGATGGGATTTGGGATGTTTTTAGAAGCCAAAATGCTGTTGATTTTGCTCGGCGCAGGCTTCAAGAACATAACGATCCTGCCATCTGTAGCAAGGATCTTGTAAACGAGGCATTGAAGAGAAACAGTGGAGATAATTTAGCTGCTGTTGTGATTTGCTTCCAAGAACAGCCTCCACCTAACTTAGTTCTTCCTCGTTCGAGAGTTCAGAGGAGCTTTTCTGCCGAAGGTTTGAAGGACCTGCAAAGCTTTTTAGACACCTTGCATAACTGA 1146 0.4625 MMEETEGSAKSFENGSSSDGRPPNPLAAAYRQCLSTNNPVVAPCKKSLVRHPSLVKTKISDVSTEHCHVLEDCKSDFLPILRSGAWADVGFRTSMEDVYVCVDDIKRDYGVKSQTNGPSAFYGVFDGHGGKHAADFACFHLPKFIIEDEGFPRDIERVLASAFLQTDTAFAQACSLDAALASGTTALAALVLGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPGCLKERMRIEACGGYVDDGYLNGQLNVARALGDWHMEGMKGGDSGPLSAEPELMSTKLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAICSKDLVNEALKRNSGDNLAAVVICFQEQPPPNLVLPRSRVQRSFSAEGLKDLQSFLDTLHN* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01103 381 ProSiteProfiles PPM-type phosphatase domain profile. 82 345 IPR001932 -
Pte3g01103 381 MobiDBLite consensus disorder prediction 1 26 - -
Pte3g01103 381 Pfam Protein phosphatase 2C 90 337 IPR001932 -
Pte3g01103 381 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Pte3g01103 381 Gene3D - 63 349 IPR036457 -
Pte3g01103 381 SMART PP2C_4 78 343 IPR001932 -
Pte3g01103 381 PANTHER PROTEIN PHOSPHATASE 2C 58 343 IPR015655 GO:0004722|GO:0006470
Pte3g01103 381 FunFam Probable protein phosphatase 2C 22 66 348 - -
Pte3g01103 381 CDD PP2Cc 82 345 IPR001932 -
Pte3g01103 381 SUPERFAMILY PP2C-like 76 347 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01103 Pte-Chr3 9426988 9429343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01103 2 382 PP2C-type Phosphatase Gene Family AT2G25620 69.367 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pte3g01103 PP2C 1.5e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01103 K14803 - zju:107421256 609.757