Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01098 ATGTTGGTTCAGGTTGAGAATCACCTTGAGGGAGTGCCGTTTTATGGGCCAAGGAGTGACATTTCTATAGCTGAGATCAGTAATAGGTTAGTTGGTTGCAAGAGAAGCAATTCAGACTCCAGTTTCATGGGTTCATCTAGAGATGGATTCTCTCAAATACCTCGGGATTCTTTTCAGAATTCGCACTTGATGAAGATGCTCCAGAATGCTAAAGGTGGGGAACTGCATAGAAGGTACAATGATGACGAGGCAATTCTCAGCATGCAGCAACTACGACCAATCTCTACTGCTCCTATATTACACCCACCTATCGGCAGTAAGGTGAATGCTAGCTTCTCGAAATGGGAGCAATCTATTCTCATGAATGGTGGTCCAGTCACCCAGCAGCCATCACATGGGGTTCCAGTCGCTCCTTTTGTGCATCAGGTAGGTTCCAACAAGGTTGGAGATGCCAACGCTGGCCCTTCACTTATGTCTCAGTTCGCTGCTGATGAAGGATCTAGAACTGGAATGAAAGGGCCTGGAATTCTGAGTTCTATTAAAGCAAGCACTCCTGCCTCAGATAAAGTTCCTCCTGGAGTTCTTTTAAGTGGCAGCAGGCAAAAGTCTGGCACTAACATTGCAGAGACAGAGACTTCTACTCCTCCAAGTCGAAATGAACTGGCATCTGCAAGCCGGCAAATGACTATATTTTACGGTGGTCAGGCTCATGTATTTGATGACGTCCATCCTAACAAGGCAGATATTATTATGGCTTTGGCTGGATCAAATGGAGGGTCATGGTCTACAACATACTCACCCAAATCTACAGGAAAAGTAGTTGGTGATGGAAATGTGATCGGTGGAGAGAATGAGATAGTTGTAGGGAATAAAAGAGCGTGTCCACAGGAATTTCAATGCAGATTACCCGTTACTGCACACTCCAACCATCTTATCAGTTCTAGCGACAGGCTAGGTAACCCATCAGGGGTACCTCGTGGAAGCAACTTATCTAAGGATACCAAAAGGCCTGCATTTCAATCAGCAGAACCGAGTTCTGAAGATAAAAAAGGCCTTTGA 1059 0.4533 MLVQVENHLEGVPFYGPRSDISIAEISNRLVGCKRSNSDSSFMGSSRDGFSQIPRDSFQNSHLMKMLQNAKGGELHRRYNDDEAILSMQQLRPISTAPILHPPIGSKVNASFSKWEQSILMNGGPVTQQPSHGVPVAPFVHQVGSNKVGDANAGPSLMSQFAADEGSRTGMKGPGILSSIKASTPASDKVPPGVLLSGSRQKSGTNIAETETSTPPSRNELASASRQMTIFYGGQAHVFDDVHPNKADIIMALAGSNGGSWSTTYSPKSTGKVVGDGNVIGGENEIVVGNKRACPQEFQCRLPVTAHSNHLISSSDRLGNPSGVPRGSNLSKDTKRPAFQSAEPSSEDKKGL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01098 352 SMART tify_2 221 256 IPR010399 -
Pte3g01098 352 MobiDBLite consensus disorder prediction 312 341 - -
Pte3g01098 352 MobiDBLite consensus disorder prediction 312 352 - -
Pte3g01098 352 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 21 303 IPR040390 -
Pte3g01098 352 MobiDBLite consensus disorder prediction 182 220 - -
Pte3g01098 352 MobiDBLite consensus disorder prediction 198 220 - -
Pte3g01098 352 Pfam tify domain 223 255 IPR010399 -
Pte3g01098 352 ProSiteProfiles Tify domain profile. 221 256 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01098 Pte-Chr3 9362667 9366984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01098 7 254 Tify Gene Family AT4G32570 39.357 1.38e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte3g01098 tify 3.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01098 - - qsa:O6P43_019399 436.417