Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01069 ATGCCCGTCAAAGTAAACTTCGGTATCTGGGGTTCTCTCCTTGCTTCCTGTGTTATTAATTTGAACGTGGAATTAGGGGTGGTGGCAACCAAAGAAATGTTCAGATCGAATCTCAATAATTCTGGTGCATATATCATGTTGTCCAATATGTATGCTGCTGCTCATGAGCATAAAGATGTCATGAGAGTGAGACAGGGGGTTAATGAAGTTCATAGTGGCGTGTTGATGAAGCTCGATTCCGAAGACAGTCTTGGTGTTGCATTTGGGCTTGAGTTATCGTGGCTGGGGGTTGTCGGTGAATGGGTAAAATGGGTTAGTAGTATGGTGAGTAGGGTGGTGATGGCGACGAGGATGAGGAAGCAGAACTTGAAGAATTTTATGATTATAGCGGCAGGCGACGGAAGTGATGGTGTTGTACTTGGTTCCCGTGAATTTTTGCGATATTATCGTCAAAAGCCACCAGCATCACCTGCAAACATGTCGATCACTGCTGCGTTGGCGTCAAGGTTCAGATGTATGGGTTTGGTTTGGCTACTGTTCGATCAAGAGAAGAGTGTGAGGATGAAGGTGCTAAAAGAAATGAACAGATCTGGGGTGGAGGCCATGTGCAGTAAGATAGAAATGAAGAGCAACGTCATTAGAAACCTGCCAAAGAATGTTCCACATTAG 669 0.4484 MPVKVNFGIWGSLLASCVINLNVELGVVATKEMFRSNLNNSGAYIMLSNMYAAAHEHKDVMRVRQGVNEVHSGVLMKLDSEDSLGVAFGLELSWLGVVGEWVKWVSSMVSRVVMATRMRKQNLKNFMIIAAGDGSDGVVLGSREFLRYYRQKPPASPANMSITAALASRFRCMGLVWLLFDQEKSVRMKVLKEMNRSGVEAMCSKIEMKSNVIRNLPKNVPH* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01069 222 Pfam E motif 22 65 IPR046848 -
Pte3g01069 222 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Pte3g01069 222 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 67 IPR046960 GO:0003723|GO:0009451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01069 Pte-Chr3 9091671 9092615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01069 139 223 C2H2 Transcription Factor Family AT4G31420 55.814 4.78e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01069 K14816 - gmx:100796317 120.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01069 3 9091671 9092615 Pte3g01069 3 9091671 9092615 RCT