Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01063 ATGGATGACTATTCTGGTAAAAGAGCTATTGATGGAGGGTTAGGATCTGGTCTTGTGTTTAGAGATGCTGCAAACAATAGGGATCGAAATGCTCAATTTTGCAAACATCTTGGTTGCGGTGGAAGCATCAACTCTCCAAAAGATGTCAAAAAAGATTGTTCTGAAAACAGTAAATCTCAGAGGCCATCTCACCGTTCCTCCTCAAGTGGTAAAGAAGTTATTGATTCATCAGAAACTAGTAGTTTGCAAGATGAACCAGGAGTTTTGGAGATCCCCACTCATCCTGAGAAGATACAGAGAGGCCTTCCAGCTGCATCTGAAATTGCACGCTCAAGTAATGCAATTGTGTTGGAAGTAGGAAGTTCTAGTGTAGTGTCTAAAAAACGACCAAATAATTTTGATCAAAGGAATGGCTTGCATAGTCAAGATACTGGAGCCTGTAGTTCTTTTCCTTCAGGGTCTAGAAGCAATGGCGAGATGACACATGCTGGTACCAGCAGATATGGTTTAAGGAACTTCAGATGCAATTCTATATCTGATGCGTTTCCCCCAGGATGTTCCTCTTCAGATTCAAACCTACATAAAAAGAAAAATATTATAAAAAAAGTAAACCATGAGGGAGAAAGTAGCTCTGCTGCTCGAAGGAAGAAGATAGTTGGATCAACATTAAAAGGACGGAGTGTCAGTACCAAAAATGGTATTTCTATCACGGAGTCAAGAACAGTCAGAAACATCCCTCCCGACAGGGATACCACAGTGACCTCACTTAGTACACAACAAGTAAACACTGGTCGCACTAGAGCGAGGCTCTCAAATCAAGGGAATGAAAATTTTGTGTCCTTAAATGGTGAACCTTTCAAGATATCTCCTAATCATCCTGACAACCTCGGTCATCCAGCTTCTTATAGTCTACCAGGAAGTAGTAGTGAACGTGCTATTTCTCCTACCAGTCCTGTGGAATTTGGCATTAGCCGCAGCCTGATAGGTCGGGATAACATTAGACGCTATAACATGGATGGCATTGCAGAGGTGTTGTTGGCTTTCGAGAGGATTGAACAAGACGAAGAACTTACACATGTGCAAATCCTAGTTCTGGAGACCCACTTGCTCCTGAACGGTCTAACATTTTATGATCAGCATAGGGATTTGAGGCTGGACATTGATAATATGTCATATGAGGAATTGTTAGCTCTGGAAGAGAGGATGGGTACTGTGAGCACAGCACTTACAGAGGAAGCATTGGTGGCATCTTTGAAGAAAAGCGTATATCAGTCTGAACTATCAAATGATGAAACCGAGGGTTATCATCAGGATGATGATAGTAAATGCAGTATTTGTCAGGAAGAATATGTGGTGGGAGATGAAGTTGGAAGTTTACAGTGTAAACATAGCGCCAAGGATATCCCAGAGAAAGAGACGCAGGCAGCTTTCAAGACTTGGCGCACTGCAAATAGCTAG 1458 0.4211 MDDYSGKRAIDGGLGSGLVFRDAANNRDRNAQFCKHLGCGGSINSPKDVKKDCSENSKSQRPSHRSSSSGKEVIDSSETSSLQDEPGVLEIPTHPEKIQRGLPAASEIARSSNAIVLEVGSSSVVSKKRPNNFDQRNGLHSQDTGACSSFPSGSRSNGEMTHAGTSRYGLRNFRCNSISDAFPPGCSSSDSNLHKKKNIIKKVNHEGESSSAARRKKIVGSTLKGRSVSTKNGISITESRTVRNIPPDRDTTVTSLSTQQVNTGRTRARLSNQGNENFVSLNGEPFKISPNHPDNLGHPASYSLPGSSSERAISPTSPVEFGISRSLIGRDNIRRYNMDGIAEVLLAFERIEQDEELTHVQILVLETHLLLNGLTFYDQHRDLRLDIDNMSYEELLALEERMGTVSTALTEEALVASLKKSVYQSELSNDETEGYHQDDDSKCSICQEEYVVGDEVGSLQCKHSAKDIPEKETQAAFKTWRTANS* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01063 485 MobiDBLite consensus disorder prediction 60 86 - -
Pte3g01063 485 MobiDBLite consensus disorder prediction 37 95 - -
Pte3g01063 485 MobiDBLite consensus disorder prediction 127 163 - -
Pte3g01063 485 SUPERFAMILY RING/U-box 426 463 - -
Pte3g01063 485 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 41 464 IPR045191 GO:0061630
Pte3g01063 485 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 400 467 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01063 Pte-Chr3 9052637 9056393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01063 323 463 C3H Transcription Factor Family AT2G15530 43.662 2.89e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01063 - - qsa:O6P43_019348 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01063 3 9052637 9056393 Pte3g01063 3 9052637 9056393 RCT