Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01053 ATGGAATTGAAGAGAGAGAAGCTTGTGAGGTTTTATGACGACGGGAAGCAAAAAGATCAATCTTGCATTCCATTGCCTTTGTACAAGATACAGCCAGAACCTTTGTTGCACAACGAAGGTACCCCTGTCGTTGTTAATGGTCACAAAACCAAGACTAAAAACCATAGAAATCCCAGATTTGGAAGGTTTAAGGTCTTCCCTGAAACCCATGAGCCATGGCAGAAACGGATTCTTGATCCTGGAAGTGAAATAGTTCTGCAGTGGAACCGGGTGTTTTTATTTTCTTGCTTGGTAGCCTTATCTGTTGATCCTTTGTTCTTTTTTCTGCCATCAGTGGCAAATGTTGACGGCTCATCGTGTATGGAAACTGATTTGAATTTAGGAATTGTTGTCACTTGTTTCCGTACTTTTGCTGATATGTTCTATCTGATAAACATGATCATGAAGTTCCGTACCGCCTATGTATCGCCTAGTTCAAGGGTTTTTGGAAGGGGTGAGCTTGTTTTGGATCCAAAGAAGATTGCTAAGCGGTATTTGAGGTCAGAGTTCTGCACAGATTTTGTAGCTACACTACCTCTTCCCCAGATTATGATTTGGTCTATCATTCCATCGATAAGAAGATCCCACGGTGATCATACCACCAATTCTCTCGTACTGATAGTGCTGCTCCAATACATTCCAAGATTGTATCTTATTTTCCCATTAAGTGCTCAGATTATTAAAGCCACAGGTGTTGCCACAAAGACGGCTTGGGCTGGTGCTGCATATAATCTTTTACTTTACATGCTGGCCAGTCATGTCTTAGGTGCATCGTGGTATTTGCTGTCAATGGAACGGTATGCAACATGCTGGAAATCAGAATGTGAGAGTGAAATAACCCCATTGAAGTGCTTTCTCCCATACCTCGACTGTGGAACTCTGAATAATAATGACCGCAAGATATGGCGTAACAGTACTAACGTGTTTAGTAATTGTGATCCACAAAACAACATCAGCTTCAAATTTGGAATTTTCGCGGATGCCATAAATAATGTTGTTTCCTCAAACTTCACAGAGAAGTACCTCTATTGTTTATGGTGGGGCTTGCAGAATCTGAGTTCTTATGGTCAGAATCTGAGTACAAGTACCTTTATTGGGGAAACTGCATTTGCAATACTCATAGCTATATTGGGTCTGGTTTTGTTTGCTCACTTAATTGGTAACATGCAGACCTATTTGCAATCTCTTACCGTGAGGCTTGAGGAGTGGAGGCTTAAGCGACGAGACACTGAAGAGTGGATGAAACACCGCCAACTCCCAGAAGATCTACGAAAACGTGTCCGACGTTTTGTTCAATACAAGTGGCTTGCAACACGGGGGGTTGATGAAGAGTCAATTTTACGAGCATTGCCCACAGATCTTCGTCGAGATATTCAGCACCACCTTTGCTTGGACCTTGTTCGACGAGTCCCCTTTTTTGCTCAGATGAATGATCAACTGCTTGATGCAATATGTGAACGGCTGGTATCATCCTTGAATACTCAGGGCACGTACATAGTTAGGGAAGGTGATCCTGTGACTGAGATGCTTTTTATCATCCGGGGGAGGCTAGAAAGCTCTACTACAAACGGAGGCCGTACTGGTTTCTTCAACTCTATAACTCTTAGGCCTGGTGATTTTTGTGGGGAAGAGCTCCTTGCATGGGCATTGCACCCAAAGTCTGCTCTCAATCTACCTTCTTCCACAAGAACGGTTAGAGCTCTTGTAGAAGTTGAAGCATTTGCATTACGAGCAGAAGACCTTAAATTTGTTGCCAATCAGTTTAGACATCTTCACAGTAAAAAACTACAGCATACCTTCCGTTTCTACTCTTACCACTGGAGGACATGGGGTGCATGCTTTATTCAAGCGGCTTGGCGTCGATTCAAGAGGAGGAAGATAGCGAAAAATCTTAGCATGTCCGAGTCATTTTCGTACGGGCAAGTCAATGCTCAAACAGAAAATGAGGCAAAAGAGCATAGCATTGTTTCATCGAGTAATTCACTGGGGGTCACGATATTGGCTTCTAGATTTGCTGCAAATACTAGGAGAGGAATTCAGAAGGTCAAGGTTGTTGGAATGCCCAAGTTGCAAAAGCCAGAGGAACCTGACTTCTCAATGGAGCCAGAGGATGATTAG 2157 0.4302 MELKREKLVRFYDDGKQKDQSCIPLPLYKIQPEPLLHNEGTPVVVNGHKTKTKNHRNPRFGRFKVFPETHEPWQKRILDPGSEIVLQWNRVFLFSCLVALSVDPLFFFLPSVANVDGSSCMETDLNLGIVVTCFRTFADMFYLINMIMKFRTAYVSPSSRVFGRGELVLDPKKIAKRYLRSEFCTDFVATLPLPQIMIWSIIPSIRRSHGDHTTNSLVLIVLLQYIPRLYLIFPLSAQIIKATGVATKTAWAGAAYNLLLYMLASHVLGASWYLLSMERYATCWKSECESEITPLKCFLPYLDCGTLNNNDRKIWRNSTNVFSNCDPQNNISFKFGIFADAINNVVSSNFTEKYLYCLWWGLQNLSSYGQNLSTSTFIGETAFAILIAILGLVLFAHLIGNMQTYLQSLTVRLEEWRLKRRDTEEWMKHRQLPEDLRKRVRRFVQYKWLATRGVDEESILRALPTDLRRDIQHHLCLDLVRRVPFFAQMNDQLLDAICERLVSSLNTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALHPKSALNLPSSTRTVRALVEVEAFALRAEDLKFVANQFRHLHSKKLQHTFRFYSYHWRTWGACFIQAAWRRFKRRKIAKNLSMSESFSYGQVNAQTENEAKEHSIVSSSNSLGVTILASRFAANTRRGIQKVKVVGMPKLQKPEEPDFSMEPEDD* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01053 718 Gene3D Helix hairpin bin 412 476 - -
Pte3g01053 718 SMART cnmp_10 485 616 IPR000595 -
Pte3g01053 718 Pfam Ion transport protein 88 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte3g01053 718 FunFam Cyclic nucleotide-gated ion channel 1 412 476 - -
Pte3g01053 718 SUPERFAMILY cAMP-binding domain-like 415 607 IPR018490 -
Pte3g01053 718 Pfam Cyclic nucleotide-binding domain 508 596 IPR000595 -
Pte3g01053 718 Gene3D Jelly Rolls 483 603 IPR014710 -
Pte3g01053 718 FunFam Cyclic nucleotide-gated ion channel 1 483 601 - -
Pte3g01053 718 SUPERFAMILY Voltage-gated potassium channels 82 407 - -
Pte3g01053 718 PRINTS EAG/ELK/ERG potassium channel family signature 354 371 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g01053 718 PRINTS EAG/ELK/ERG potassium channel family signature 146 155 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g01053 718 PRINTS EAG/ELK/ERG potassium channel family signature 398 407 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g01053 718 PRINTS EAG/ELK/ERG potassium channel family signature 448 455 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g01053 718 PRINTS EAG/ELK/ERG potassium channel family signature 263 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g01053 718 PRINTS EAG/ELK/ERG potassium channel family signature 380 391 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g01053 718 ProSiteProfiles cAMP/cGMP binding motif profile. 485 568 IPR000595 -
Pte3g01053 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 711 - -
Pte3g01053 718 CDD CAP_ED 485 616 IPR000595 -
Pte3g01053 718 Gene3D - 105 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01053 Pte-Chr3 8962978 8966981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01053 10 714 Ion Channels AT2G24610 70.776 0.0 1029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01053 K05391 - qsa:O6P43_015572 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01053 3 8962978 8966981 Pte3g01053 3 8962978 8966981 RCT