Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01050 ATGGTACTACTCCTTGGAGCCTGTCCTGAATACGGTTGCTTAGTATATGAATACATGGCGCATGGGAGTTTGGAGGATAGTCTAATGCGCCGAGGCAATAGTCCACCCCTGTCATGGCAGCTTAGATTTAAAATTGCAGCTGAAATTGGCACTGGTTTGCTGTTCTTACATCAGACAAAACCAGAGCCACTAGTCCACCGTGACCTGAAACCAGGCAACATCTTGCTCGACCGCAATTATGTCGCAAAAATCAGCGATGTTGGCCTGGCAAGACTTGTACCTCCATCTGTGGCAGAGAATGTAACACAATATCGCATGACAGCTACTGCCGGCACTTTCTGCTACATTGATCCGGAGTATCAGCAGACAGGAATGCTTGGTGTGAAATCTGATATATACTCACTTGGAATCATGTTCCTGCAGATAATAACTGCTAAACCGCCAATGGGGTTGACTCACCATATTGAAAGAAGCATTGAGAAGGGGACATTCGGCCAGTTGTTGGATCCTGCAGTGACAGATTGGCCAGTTGAAGAGGCCCTGAACTTTGCCAAGTTGGCACTCAAGTGTGCAGAATTAAGGAGAAAGGACAGGCCTGACCTTCGCAAGGTTATCTTGCCAGAACTTGACAGATTGAGAGACCTTGCTGAGAATAGCATGCACAATAATAAATACTTCTGA 681 0.4626 MVLLLGACPEYGCLVYEYMAHGSLEDSLMRRGNSPPLSWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDRNYVAKISDVGLARLVPPSVAENVTQYRMTATAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQIITAKPPMGLTHHIERSIEKGTFGQLLDPAVTDWPVEEALNFAKLALKCAELRRKDRPDLRKVILPELDRLRDLAENSMHNNKYF* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01050 226 SMART serkin_6 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01050 226 FunFam U-box domain-containing protein 51 19 219 - -
Pte3g01050 226 Pfam Protein kinase domain 11 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01050 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Pte3g01050 226 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01050 226 SUPERFAMILY Protein kinase-like (PK-like) 3 205 IPR011009 -
Pte3g01050 226 PIRSF ILK 1 225 - -
Pte3g01050 226 Gene3D Transferase(Phosphotransferase) domain 1 1 216 - -
Pte3g01050 226 PANTHER OS02G0152300 PROTEIN 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01050 Pte-Chr3 8937246 8938516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01050 1 225 Receptor kinase-like Gene Family AT1G78940 76.444 8.65e-126 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pte3g01050 Pkinase 1.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01050 - - qsa:O6P43_019335 405.601