Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01046 ATGGATTCAAAAAAATCTAACAACATCAAAGAAATTGTTAGACTTCAGCAGCTGTTCAAGAAATGGAAAACGTTTTCAAAAACTTCAAAAGCCAGCGGCGGGAGCATGAGGTTTTCGAAGAAGACTGAAACATCAAGCAGTGTTTTTCCGAAAGGGTACATTGCTGTTTGTGTTGGAGAGGAGCTCAAGAGATCTATCATACCGATTGAGTATCTGGCTCATCATGCCTTTCGTGTATTACTGAGAGAAGCAGAAGAAGAATTTGGGTTCCAGCAGACTGGTGTTCTGAGATTCCCGTGTCAAGTTTCCATCTTTGAGAGTATCTTGAATATGGTGCAGCAAAAGCAGGTGTTTCTCACTCAAGAATGTCGACTTAGCTATGAAGAGAGAATGGGATGTTGCTCTTCTGAAAGATCACTAGTAATATCTAATCTTCCACATCGCCCAATGTGCAAGTAA 459 0.4074 MDSKKSNNIKEIVRLQQLFKKWKTFSKTSKASGGSMRFSKKTETSSSVFPKGYIAVCVGEELKRSIIPIEYLAHHAFRVLLREAEEEFGFQQTGVLRFPCQVSIFESILNMVQQKQVFLTQECRLSYEERMGCCSSERSLVISNLPHRPMCK* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01046 152 Pfam Auxin responsive protein 17 112 IPR003676 GO:0009733
Pte3g01046 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01046 Pte-Chr3 8901943 8902401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01046 1 153 Calmodulin-binding Proteins AT2G24400 47.283 2.43e-44 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01046 K14488 - qsa:O6P43_019325 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01046 3 8901943 8902401 Pte3g01046 3 8901943 8902401 RCT