Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01044 ATGGAGCCAAAATCTGTGGCTTTCGCTGGCCGATCGAACATGAAGAAAAGCCCGTCCGAGTTGGCTCTAGAAGAGTTTCTCAACAAGACAGAGATCGGTGTGGCTGAATCTGTCACTGTCTCTGACAAAGACGAAAGAATCTTCCAGAAAGATAGAATTTTCTCTGAAATCCATGGGTTACTCGGTGATATCTACTCCGGCGAATTCAACATCGCTTTCAGAAATCGGGACACCATGACTAATTTCTCAACTTGTGCTGAACTTCATGATGCTCCTTTATGGTCACAGCGAGTGACTACCAAACACTCTAGCATCTCTGCTACTATTGATTCTCAGTCATCTGCTTGTGATAATGCTGGCAGTCCAGTATCAGCTAATAAACCAAAAAGCAGAGAGAATCAAGCAAAAGAAGTGACCAGTGGATCATCACATGAACTGTCAGATGAAGACGATGAAGCTGGTCCTTGTGAAGAGAGCACAGACCCTGTTGACTTGAAACGTCTTCGCAGGATGGTCTCCAATCGAGAGTCTGCTCGGCGATCAAGAAGAAGAAAACAAGCACATTTAACGGAGCTGGAAATGCAGGTTGAACAACTTAGAGGGGAAAATGCAACTCTTTACAAGCAGCTCACAGATGCGACTCAGCAGTACCGTGAGGCTGACACAAACAATCGAGTGCTCAAATCAGATGTGGAAGCTTTAAGAGCCAAGGTAAAGTTGGCTGAAGATATGGTTGCAAGGGGCTCCTCCATGACCTGCAGTTTAAATCAGATGCTGCAAAGTCATATCAGCCCGACCCCGCAGCTAACTGCAAACAATTTACGGAGCATGGCATACGTCTCACCGTCTATCACAGTTCAAGCGGACGAGGCCTCTTTTGCGGCAATGTCACTTTCTGCACAGAACTCAGCACTTGGACTTGGAAGCATTGATATCAGGAATAGCAATATCAAGACCGCAGGAGTCATGAGTGATGCAGTGAGCTGCGTGTCTGACATGTGGCCATCGTCAGTGTAG 1017 0.4641 MEPKSVAFAGRSNMKKSPSELALEEFLNKTEIGVAESVTVSDKDERIFQKDRIFSEIHGLLGDIYSGEFNIAFRNRDTMTNFSTCAELHDAPLWSQRVTTKHSSISATIDSQSSACDNAGSPVSANKPKSRENQAKEVTSGSSHELSDEDDEAGPCEESTDPVDLKRLRRMVSNRESARRSRRRKQAHLTELEMQVEQLRGENATLYKQLTDATQQYREADTNNRVLKSDVEALRAKVKLAEDMVARGSSMTCSLNQMLQSHISPTPQLTANNLRSMAYVSPSITVQADEASFAAMSLSAQNSALGLGSIDIRNSNIKTAGVMSDAVSCVSDMWPSSV* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01044 338 Pfam bZIP transcription factor 165 218 IPR004827 GO:0003700|GO:0006355
Pte3g01044 338 MobiDBLite consensus disorder prediction 105 141 - -
Pte3g01044 338 CDD bZIP_plant_GBF1 167 218 IPR045314 GO:0003700|GO:0006355
Pte3g01044 338 SUPERFAMILY Leucine zipper domain 166 217 IPR046347 GO:0003700|GO:0006355
Pte3g01044 338 FunFam BZIP transcription factor 164 215 - -
Pte3g01044 338 SMART brlzneu 162 226 IPR004827 GO:0003700|GO:0006355
Pte3g01044 338 Coils Coil 175 244 - -
Pte3g01044 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 169 184 IPR004827 GO:0003700|GO:0006355
Pte3g01044 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 227 IPR004827 GO:0003700|GO:0006355
Pte3g01044 338 PANTHER BASIC LEUCINE ZIPPER 63 11 319 - -
Pte3g01044 338 Pfam Basic leucine-zipper C terminal 233 313 IPR020983 -
Pte3g01044 338 Gene3D - 165 222 - -
Pte3g01044 338 MobiDBLite consensus disorder prediction 159 175 - -
Pte3g01044 338 MobiDBLite consensus disorder prediction 105 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01044 Pte-Chr3 8890335 8894130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01044 14 335 bZIP Transcription Factor Family AT5G24800 48.318 6.74e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte3g01044 bZIP_C 4.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01044 K25784 - qsa:O6P43_015554 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01044 3 8890335 8894130 Pte3g01044 3 8890335 8894130 RCT