Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01043 ATGGGGGCTCAGAAAATGGTATCTCAAAGTGGAGGTGTCCAAGAGGCAAAGTTACAATCTTTGTCTAGGCAAGGATCTTTGTACAGTCTCACCCTTGATGAGGTCCAGACCCAGCTTGGAGATTTAGGAAAACCATTAGGCAGCATGAATCTTGATGAGCTGCTTAAGAGTGTGTGGACTGTTGAAGCTAACCAAACCACAGGATTACATGCTGATACTAACACTAACATGCAGGGTAGCCAGCTAGCTTCTGCTTCATCTTTGCAAAAGCAAGCCAGTATAACATTTTCCGGAGATCTTAGCAAGAAAACTGTTGATGAGGTTTGGAGAGATATTCAACACAAGAAGAGCAATGACCAAGAGAGGAGAACTCAAGAGAGACATCCTACTCTTGGAGAAATGACCCTTGAGGAGTTCTTGATCAAAGCTGGTGTGGCTACTGAATCATCTCATGCCAACACAAATATTGTGTCGGCGGTTGATTTAAATGTATCCACCCAACAAAACATCCAACATAACACTAATTGGACGCAGTATCAGCTCCCTTCAGTACAGTTACCACAACACCAACATCATGAGAATATCCTGTGTGGTTTTGTGCCAGGCAACGTAGTTCATCAGCCTTTCTCAGTTACTGCAAATACCATAATCGAAACGGGGTACTCTGACACGATGATGACTATGTCGCCTTCGTCGTTGATGGGGACTTCATCAGAAACACAAGCTCCGGGGCGTAAGAGGGTTGCCCGTGGAGACGTAGTTGAGAAAACTGTTGAGAGGAGACAGAAGAGAATGATTAAGAATAGGGAATCTGCAGCTCGGTCCCGTGCAAGAAAACAGGCTTATACAAATGAGCTGGAGCTTAAAGTCTCTCGTCTAGAAGAAGAGAATGAAAGGCTTAGAAGACTGAGGGTACTTGTCATATTCTGTTTCTATCAGAATGATCTATGCCTATTATTCTGCTGCTCAAAAGGAAGTAGACAAAGTATTGCCGTCTGTACCTCCACCTGA 1011 0.4402 MGAQKMVSQSGGVQEAKLQSLSRQGSLYSLTLDEVQTQLGDLGKPLGSMNLDELLKSVWTVEANQTTGLHADTNTNMQGSQLASASSLQKQASITFSGDLSKKTVDEVWRDIQHKKSNDQERRTQERHPTLGEMTLEEFLIKAGVATESSHANTNIVSAVDLNVSTQQNIQHNTNWTQYQLPSVQLPQHQHHENILCGFVPGNVVHQPFSVTANTIIETGYSDTMMTMSPSSLMGTSSETQAPGRKRVARGDVVEKTVERRQKRMIKNRESAARSRARKQAYTNELELKVSRLEEENERLRRLRVLVIFCFYQNDLCLLFCCSKGSRQSIAVCTST* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01043 336 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 302 IPR004827 GO:0003700|GO:0006355
Pte3g01043 336 SUPERFAMILY Leucine zipper domain 260 302 IPR046347 GO:0003700|GO:0006355
Pte3g01043 336 CDD bZIP_plant_BZIP46 260 306 - -
Pte3g01043 336 SMART brlzneu 256 319 IPR004827 GO:0003700|GO:0006355
Pte3g01043 336 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 21 303 IPR043452 GO:0003700|GO:0045893
Pte3g01043 336 Coils Coil 276 303 - -
Pte3g01043 336 Gene3D - 258 307 - -
Pte3g01043 336 Pfam bZIP transcription factor 260 301 IPR004827 GO:0003700|GO:0006355
Pte3g01043 336 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 263 278 IPR004827 GO:0003700|GO:0006355
Pte3g01043 336 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 258 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01043 Pte-Chr3 8884234 8888967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01043 6 302 bZIP Transcription Factor Family AT3G56850 54.305 8.51e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte3g01043 bZIP_1 1.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01043 K14432 - qsa:O6P43_006268 380.178