Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01042 ATGCTGAACAGCTCCCGGTCATTGGGGGTCTTAGGCAGTTGTGCTATAAAATCTGTTGTCCCAGCTGGTGGAAGCAATGGGAAACAGCGGTTAAGATGGACATCAGATATCCATAACCGTTTCGTAGATGTCATAGCACAGCTTGGTGGACCAGATAGTGGGTCCAGACAGTTACAAATGAGGATTGAAGCACAGGGAAAGTATTTGGAGAAAATCATAGAGGAACAGCAGAAACTTGGCAGCGCGTTGAAAGCCTTTGAGATTTCTCCGTCATCAGAGATTAAAGAAGACCCTTCTCGCTCAGACCCTTCTGGGGATGCATCTGAAAGAGTTTTATATCCTTTGAAGAAACCAAAAGGTTAG 363 0.4518 MLNSSRSLGVLGSCAIKSVVPAGGSNGKQRLRWTSDIHNRFVDVIAQLGGPDSGSRQLQMRIEAQGKYLEKIIEEQQKLGSALKAFEISPSSEIKEDPSRSDPSGDASERVLYPLKKPKG* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01042 120 Pfam MYB-CC type transfactor, LHEQLE motif 56 78 IPR025756 -
Pte3g01042 120 Gene3D - 27 96 - -
Pte3g01042 120 MobiDBLite consensus disorder prediction 90 104 - -
Pte3g01042 120 MobiDBLite consensus disorder prediction 90 120 - -
Pte3g01042 120 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 26 52 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01042 Pte-Chr3 8881611 8884841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01042 28 61 G2-like Transcription Factor Family AT4G13640 58.824 4.56e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01042 - - qlo:115952879 85.8853