Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01031 ATGGAAGGTGAGAAATCAAACTCTACTCCTTCGGATGGGCTTGGTGAAAACATTCCGAAAATAAGAGCGCTTCCTGGGAGGACAAGTGGCCCTACAAGGCGTTCGACAAAAGGGCAATGGACACCTGAAGAGGATGATATCTTAAGAAATGCTGTCGCCCAGTTCAAAGGGAAGAATTGGAAAAAAATAGCTGAGTGTTTCAAGGATAGAACCGATGTACAATGCTTACATAGGTGGCAGAAGGTCTTGAATCCAGAGCTTATAAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATAGTGGAACTGGTGAAAAAGTATGGACCCAAAAAATGGTCTACCATTGCACAGCATCTACCAGGACGTATTGGTAAGCAGTGCCGAGAAAGGTGGCATAATCATCTTAATCCATCAATAAACAAAGAAGCATGGACCCAAGAAGAGGAGTTTGCTCTGATTCGTGCTCATCAGATTTACGGGAACAGATGGGCTGAGTTAACGAAGTTCTTGCCTGGAAGGACAGATAATGCCATAAAAAATCACTGGAATAGTTCTGTCAAGAAGAAGTTGGATTCTTATCTGAAATCAGGTTTACTTGGTCAGTTTCCAGTACTGCCAGATGTTGGAAATTCAAGTCAGCCAAAAGTGGCAACCACTTCGAGAATGCAGAATAGTGGAGATGATAGTGTTCCAAAGGGGACACAAGGAGAGGAAGTTTCAGAGTGTAGTCAGGATTCTAACATTGCTGGCTCTTTTGAGCCCGTAGGAGAAACTGCGAACGTTGTTTTACATCAAAGACCGAACTATTGTCCGTATGAAAATTCTGGTTCAAGAAATGAAGACACCTCATGTCCACAACCCTGTGAAGATTTATTCTACCCATCTCTAGATGTTGTTAGCATTTCTTTCCCAGACATACCTCAGCATGAGGGCTGTTCTTCTCAATACATGGAGCAGACATCCTTGAATGACCCTGGTGATTCTTCGAACAGTGATACCCAGTTTGCAACAGATTTCATACCAGACATCTCATCTTTTGGGCCAGGGCAGGATTCATCAAAGTTACAAACTGATTGTGTAGTCGTTGGCAACAGCAATGATGTGCGTATCCCATATCAGACTTCAGTTGGATTGTTGGATGCTTCTTGCTCCATGGGATATTCAGGTATAGACTCGGATAAGATGCACATGTTGATAACAGATGAAGAATGTTGTAGGGTCCTATTTTCAGATTCGATGCATGAAGGAAGCTTGACATCTGGAGATTATACGAATGTCAACAATATAATGGCAGTTTCTGGGAGTACTTTGGGTTTCAGCCCGTCATCAAACGCACACATTTCTGAAGCTGGCCAAATTACTGCATCACTAAGCTGTCCTCCAAATTCCGATTATACTTCTAGAATTTCATCCTCAATATCTTCAGTATCTGCTCACTCAGCACCTATTAATGGTTGTAGTAGTCTGGGACATACTTCTGAATCCAGCAGATTATTTGGACCCCGACTGCAGGTAACCTCTGAAGGTCATGATGCTTTTGAACACTCCCCTTGCATGGACAATATAGTCGACTTTGGCATGGAAGAGCACCAAGATGTTGCAAAGGATGTTGTAAAATTGGTCCCTGTAAATAATTTTGGCTGTGGATCAGAAAACAAGCAAATTTGTCCCCAATTAGACAAAAAACCAAGTGAACGTGCGGAGCAGAAGGCAGGAGCTCTATGCTACGAACCTCCTCGTTTCCCAAGCTTGGATATTCCTTTTTTCAGCTGTGATCTTATACAGTCTAACAGTGATATGCAGCAAGAGTTTAGTCCCTTAGGCATTCGGCAGCTCATGATGAATTCTATGAGCCCTCTTACCCCTTTTAGGCTATGGGACTCTCCATCTCGTGATGATAGTCCAGATGCCGTACTGAGAAGTGCTGCTAGAACTTTTACTGGTACACCATCCATTTTGAAGAAAAGAAACAGAGATTTATTGTCGCCTTTGTCAGATAGAAGGATTGACAAGAAACTTGAGACTGACATGGCATCCACCTTAAGCAGGGATTTTTCACGTTTAGATGTCATGTTTAATGAAAGTGAGAACCAGGAATTTGCTATATGCTCCAATTCTTCAATGCCACAAAAGAATTCTGAAGTCCCCACTGATGATAGAAGAAATTGTGAGCAAGAAACCAGAGATGAAGTGGAGAGATATGAACATGCAATTTCAGATGAAAAATTATCAGAAAGCGATGGAAATGGTTCACAAGATGCGCAAGCTGGTGAAGATGTGCAACAACTCCCAGGAGTCCTGATTGAACATGACATTAATGATTTGCTACTCTATTCTCCCGATCAAGTTGGTGTGAAGGCAGAGAAAACTTTGGAAACAGCATCTAACCATACTAAGCTCATGAAGTCATCTACGGGAAATCCCTGCGAAAACACTACCTCCCACTCAATTAGTGGGAAGGAGCAAGAAAGTGAGTCTGCTGGCGGTGCATGTCTACAATATGCTACGACGTCATCAGCTCCACAGAAGAATTTGTGCGAATTTGATAACGCAGGAACTGACTCTGGTTTTCAATCAATGAACATATTTGCTGGAACGTCATTTAAAAGAAGTATCGAATCACCATCAGCATGGAAGTCCCCTTGGTTCTTAAATACCTTCCTACCTAACCCATCGATGGAGGATATCAGCTTCTTCTTGAGCCCAGGTGATAGAAGCTACGATGCCTTAGGGTTGATGAAACAGATAAGTGAGCAAACTGCTGCTGCTTATGCAAATGCTCAGGAAGTCTTGATAAATGAAACTCCTAAAACAAAAGAGAAGGATAAATCTAACCAAGACCGGAGTCGAAACCAGGAATGCGACCTTCTTGTCGACCAGTTGGGCAACCACTCTCAACTGGCATCCAATGTTTTGATGGAGCGGCGCACACTCGACTTCAGCGAATGTGGAACGCCAGGGAAGGTATTGGAAAGCGGGAAATCTTCCGCGATGAGTTTTTCAAGTCCGTCATCGTATTTGTTGAAAAATTGCAGATAG 3039 0.4271 MEGEKSNSTPSDGLGENIPKIRALPGRTSGPTRRSTKGQWTPEEDDILRNAVAQFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELIKGPWSKEEDEIIVELVKKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQEEEFALIRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLKSGLLGQFPVLPDVGNSSQPKVATTSRMQNSGDDSVPKGTQGEEVSECSQDSNIAGSFEPVGETANVVLHQRPNYCPYENSGSRNEDTSCPQPCEDLFYPSLDVVSISFPDIPQHEGCSSQYMEQTSLNDPGDSSNSDTQFATDFIPDISSFGPGQDSSKLQTDCVVVGNSNDVRIPYQTSVGLLDASCSMGYSGIDSDKMHMLITDEECCRVLFSDSMHEGSLTSGDYTNVNNIMAVSGSTLGFSPSSNAHISEAGQITASLSCPPNSDYTSRISSSISSVSAHSAPINGCSSLGHTSESSRLFGPRLQVTSEGHDAFEHSPCMDNIVDFGMEEHQDVAKDVVKLVPVNNFGCGSENKQICPQLDKKPSERAEQKAGALCYEPPRFPSLDIPFFSCDLIQSNSDMQQEFSPLGIRQLMMNSMSPLTPFRLWDSPSRDDSPDAVLRSAARTFTGTPSILKKRNRDLLSPLSDRRIDKKLETDMASTLSRDFSRLDVMFNESENQEFAICSNSSMPQKNSEVPTDDRRNCEQETRDEVERYEHAISDEKLSESDGNGSQDAQAGEDVQQLPGVLIEHDINDLLLYSPDQVGVKAEKTLETASNHTKLMKSSTGNPCENTTSHSISGKEQESESAGGACLQYATTSSAPQKNLCEFDNAGTDSGFQSMNIFAGTSFKRSIESPSAWKSPWFLNTFLPNPSMEDISFFLSPGDRSYDALGLMKQISEQTAAAYANAQEVLINETPKTKEKDKSNQDRSRNQECDLLVDQLGNHSQLASNVLMERRTLDFSECGTPGKVLESGKSSAMSFSSPSSYLLKNCR* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01031 1012 CDD SANT 91 135 IPR001005 -
Pte3g01031 1012 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Pte3g01031 1012 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Pte3g01031 1012 FunFam Transcription factor MYB3R-2 142 204 - -
Pte3g01031 1012 MobiDBLite consensus disorder prediction 714 747 - -
Pte3g01031 1012 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Pte3g01031 1012 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Pte3g01031 1012 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Pte3g01031 1012 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Pte3g01031 1012 Gene3D - 36 88 - -
Pte3g01031 1012 MobiDBLite consensus disorder prediction 992 1012 - -
Pte3g01031 1012 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Pte3g01031 1012 SMART sant 88 137 IPR001005 -
Pte3g01031 1012 SMART sant 140 188 IPR001005 -
Pte3g01031 1012 SMART sant 36 85 IPR001005 -
Pte3g01031 1012 CDD SANT 40 83 IPR001005 -
Pte3g01031 1012 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Pte3g01031 1012 MobiDBLite consensus disorder prediction 1 41 - -
Pte3g01031 1012 MobiDBLite consensus disorder prediction 701 756 - -
Pte3g01031 1012 FunFam Transcriptional activator Myb isoform A 36 88 - -
Pte3g01031 1012 Gene3D - 142 198 - -
Pte3g01031 1012 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Pte3g01031 1012 MobiDBLite consensus disorder prediction 800 824 - -
Pte3g01031 1012 MobiDBLite consensus disorder prediction 209 238 - -
Pte3g01031 1012 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Pte3g01031 1012 FunFam Transcriptional activator Myb isoform A 89 141 - -
Pte3g01031 1012 CDD SANT 143 183 IPR001005 -
Pte3g01031 1012 Gene3D - 89 140 - -
Pte3g01031 1012 MobiDBLite consensus disorder prediction 991 1012 - -
Pte3g01031 1012 PANTHER MYB PROTEIN-RELATED 37 122 - -
Pte3g01031 1012 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01031 Pte-Chr3 8805344 8810750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01031 5 1013 MYB Transcription Factor Family AT4G32730 43.556 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte3g01031 Myb_DNA-bind_6 8.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01031 - K09420 qsa:O6P43_015528 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01031 3 8805344 8810750 Pte3g01031 3 8805344 8810750 RCT