Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01026 ATGGGGAAGAATGAAGTCATTTCCAACGACGCACCGAAGAATTGGATTCAGCAATTGGATTTCGATGCAAATGAGTCCACTGTCAAGCCATCTCGTGAACCTGAGGAAAATTTTAACTTAGCACTTCCATGCTCGCCGCGTGTGCCACACCTGAAGGCGCCACAGCCAAAGAAAATGCCACAAGCGGCGGCGCAGCTAGTTGAATCTGTTAGTGTAGTTCCAGAATTAGTTTCGAGACCTGCGGTGACCTCATTGCCTGCGTTGAATCAAATGTTTCCTATATCTCGATCACTGCATACCTTTGTACCAAAAGATATCACTGCGAAGAGAAAAAAGCAGTGTACTTGCAAAAACTCTCGATGTCTCAAATTGTACTGCGAGTGCTTTGCAGCAGGGATTTATTGCGGAAATTGCAACTGCTTAAATTGTCTTAATAATGTGGAGAATGAGACTGCCAGGAGGGATGCAGTAGCACTCACCTTAGAGCGTAATCCAAATGCATTTAGACCAAAAATTGCTGGCAGTCTATGTGAATCCCGACATTACAAGCTTGATCTAACCCAGGAAAATGTGGAAGAACTTCAAGTAACGGTAAGTCACAGCAGAGGATGTCATTGTAAAAAGACAGGTTGCCTCAAGAAGTATTGTGAGTGCTTTCAGGCCAACGTACTGTGCTTTGTAAATTGTAAATGCTTGGGCTGCAAGAACTATGAAGGAAGTGTTGACAAAAAGATCTTTTCCCTGGAAGATCATCATGCAGCTTTCAATAGACATGTAACTAACATAGCCATTGACGGAGTGATTGGATGTCCGGGATATGGCAGCCTAGAAACCAAAAAGAGAAAAACTAAAGAAACCGGTGCAAAATCTTCCGCAATAGACCAATCTGTTGGTTTGACTGTTCAATGTCAAAAGGAAGACCAACGAGGAGGTTCTAAGGCTTTATCTTCCTTTTCAATTGACCTTGTTTCCCACATGGCTGGAAATGGAACAGCTATAGGATCTTCAAAATTGTCGCACAGGTCCACAATTGCAGATATTCTCAAACCACAGGATGTGATGCATCTTTGTTCACTTTTGGTTGTTTTATCAGGAAAAGCTGCAGATGCTACTACAGCAGAAAGAATTGAGAAATCAAAGACAGAGAACATGAAAGCTTCCACTGCTTCCGCGATTCAATTGAGGAAACATACCAAAGATGACTTGGTTATATGTGGACCATACAGAGATGCAATTAGTTATTCTGAACCCAAAGGAGATGTTATTAGGCCATTATCCCCAGAAACACTTGAGTTGCCGTGTGATGAACACAATGATCTGTTTGAATCGTCTGGCTCCACCGACGAAGCAACTGGTCACATTAAACCGACGACCACAGGAATAAATTCTAGTGGTGAATGCTTAGGTCCTCACGGGGAGCAGGAAAGGATAGTCCTCTCCAGGTTTTGTGATTTTCTTCGCGAGCTTAGCCCTCACAGAAATACCAATGGTAAGATTTGA 1500 0.4287 MGKNEVISNDAPKNWIQQLDFDANESTVKPSREPEENFNLALPCSPRVPHLKAPQPKKMPQAAAQLVESVSVVPELVSRPAVTSLPALNQMFPISRSLHTFVPKDITAKRKKQCTCKNSRCLKLYCECFAAGIYCGNCNCLNCLNNVENETARRDAVALTLERNPNAFRPKIAGSLCESRHYKLDLTQENVEELQVTVSHSRGCHCKKTGCLKKYCECFQANVLCFVNCKCLGCKNYEGSVDKKIFSLEDHHAAFNRHVTNIAIDGVIGCPGYGSLETKKRKTKETGAKSSAIDQSVGLTVQCQKEDQRGGSKALSSFSIDLVSHMAGNGTAIGSSKLSHRSTIADILKPQDVMHLCSLLVVLSGKAADATTAERIEKSKTENMKASTASAIQLRKHTKDDLVICGPYRDAISYSEPKGDVIRPLSPETLELPCDEHNDLFESSGSTDEATGHIKPTTTGINSSGECLGPHGEQERIVLSRFCDFLRELSPHRNTNGKI* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01026 499 MobiDBLite consensus disorder prediction 444 465 - -
Pte3g01026 499 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 237 IPR005172 -
Pte3g01026 499 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 111 146 IPR005172 -
Pte3g01026 499 SMART CXC_2 109 149 IPR033467 -
Pte3g01026 499 SMART CXC_2 199 240 IPR033467 -
Pte3g01026 499 ProSiteProfiles CRC domain profile. 110 239 IPR005172 -
Pte3g01026 499 MobiDBLite consensus disorder prediction 443 469 - -
Pte3g01026 499 PANTHER TESMIN/TSO1-RELATED 27 485 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01026 Pte-Chr3 8768130 8773694 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01026 104 489 CPP Transcription Factor Family AT4G29000 41.646 5.79e-90 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pte3g01026 TCR 2.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01026 - K21776 qsa:O6P43_015521 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01026 3 8768130 8773694 Pte3g01026 3 8768130 8773694 RCT