Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01015 ATGGAATCGCCGGAATATGTCCAGAGCAGCTTCTGCCCACAATTCAACTCCGACAACAAGACCAATGCAACCGGTGGGGAACTTTTCATAGTGGACGACCTTCTTGACTTCTCCAACGACGATGCCATCGTCACCGACGGAACATATGATTCTGTTACCCCTGGAAACTCCATCGAAGGTTCCACTGTAACTGCACTGGATAACAGCTGCAATTCGTCGTCATTTTCTGGTTGTGAGCCCAATTTTGCTGCCAACTTTGGCTGCCTGAATTTTACGGACGACCAGTTATCCGGTGACCTTGTTGTGCCGTACGATGACTTGGCGGAGCTTGAATGGCTGTCCAATTTTGTGGAGGAATCATTTTCGAGCGAAGACTTACAGAAGCTTCAGCTGATATCCGGCATCAAAGCACGGAAAGAGGACGCATCCGAAATCTGTGGATTCCAACCCGAACCCAACAGGAGCAACGCGCCATTCAACCCGGAACTCTCAGTCCCTGCCAAGGCTCGCAGCAAGCGTTCCCGCGCACCACCATGCAGCTGGGCTTCCCGCCTTCTCGTCGTCTCTTCAACGGCGTCGTCAACTGAAGATGAAGTCGTCGTTTTATCTCCTCAGAGCGCGAGCACTGTAAAGAAGTCTGCTGCAAAGACAGGCATGCACAGGAAGAAGGACAGTGGGGATGGTAGCTCCGGCGATGGACGGAGATGTCAGCACTGCGCAACGGATAAGACTCCACAATGGCGAACTGGACCTATGGGTCCGAAAACGCTTTGCAACGCTTGTGGAGTAAGGTACAAGTCAGGTAGGTTGGTTCCAGAGTATAGGCCAGCTGCTAGCCCGACATTCATGCTCACAAAGCATTCGAACTCGCACAGGAAGGTGATGGAGCTCCGGAGACAGAAGGAGATGCTGGGAGTACAGACATTACAGCATCCAACTCATCAGCAGCTCCTGCAACAGCAAGCGATGATGTTCGATGCATCCAATGGCGATGAATACCTTATCCGCCAACATGTTGGTCCCGATATCGGGCATCTAATTTAG 1044 0.5182 MESPEYVQSSFCPQFNSDNKTNATGGELFIVDDLLDFSNDDAIVTDGTYDSVTPGNSIEGSTVTALDNSCNSSSFSGCEPNFAANFGCLNFTDDQLSGDLVVPYDDLAELEWLSNFVEESFSSEDLQKLQLISGIKARKEDASEICGFQPEPNRSNAPFNPELSVPAKARSKRSRAPPCSWASRLLVVSSTASSTEDEVVVLSPQSASTVKKSAAKTGMHRKKDSGDGSSGDGRRCQHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMLTKHSNSHRKVMELRRQKEMLGVQTLQHPTHQQLLQQQAMMFDASNGDEYLIRQHVGPDIGHLI* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01015 347 CDD ZnF_GATA 235 282 IPR000679 GO:0006355|GO:0043565
Pte3g01015 347 MobiDBLite consensus disorder prediction 197 237 - -
Pte3g01015 347 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 232 294 - -
Pte3g01015 347 ProSiteProfiles GATA-type zinc finger domain profile. 230 266 IPR000679 GO:0006355|GO:0043565
Pte3g01015 347 MobiDBLite consensus disorder prediction 197 213 - -
Pte3g01015 347 MobiDBLite consensus disorder prediction 146 175 - -
Pte3g01015 347 SMART GATA_3 230 280 IPR000679 GO:0006355|GO:0043565
Pte3g01015 347 MobiDBLite consensus disorder prediction 219 237 - -
Pte3g01015 347 Gene3D - 227 302 IPR013088 GO:0006355|GO:0008270
Pte3g01015 347 PIRSF Txn_fac_GATA_plant 12 325 IPR016679 GO:0003677|GO:0005634|GO:0045893
Pte3g01015 347 ProSitePatterns GATA-type zinc finger domain. 236 261 IPR000679 GO:0006355|GO:0043565
Pte3g01015 347 Pfam GATA zinc finger 236 269 IPR000679 GO:0006355|GO:0043565
Pte3g01015 347 FunFam GATA transcription factor 226 313 - -
Pte3g01015 347 PANTHER GATA TRANSCRIPTION FACTOR 18 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01015 Pte-Chr3 8689225 8691197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01015 29 348 C2C2-Gata Transcription Factor Family AT5G25830 51.632 3.53e-91 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte3g01015 GATA 4e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01015 - - qsa:O6P43_015488 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01015 3 8689225 8691197 Pte3g01015 3 8689225 8691197 RCT