Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01014 ATGAGGACGGTAAGTTCTAGCTGCGAAGATGGCAGTGATAGCCCGAAGGGTGTAATGGATAACGGCAAGTATGTTCGCTACACACCCGAGCAGGTTGAAGCACTGGAAAGGCTTTATCATGAATGTCCAAAGCCCAGTTCCATACGACGCCAGCAGCTCATTCGAGAGTGCCCCATTCTCTCTAACATCGAGCCCAAACAGATCAAAGTTTGGTTTCAGAATCGAAGATGCAGAGAAAAGCAGCGCAAGGAGTCAGCTAGCCTGCAAGCCGTTAACAGAAAGCTATCAGCGATGAATAAACTCCTGATGGAGGAAAATGAGAGGCTGCAGAAGCAGGTGTCTCAGCTGGTGTACGAGAATAGTTTTTTCCGCCAAAAAACACAGAATACGACCCTAGCTACCACGGATACAAGCTGCGAGTCTGTGGTAACCAGTGTTCAACCCCACTTGACACCTCAGTATCCGCCAAGAGATGCCAGCCCTGCGGGTCTTCTGTCCATTGCAGAGGAGACTTTAACAGAGTTTCTTTCAAAGGCCACTGGAACTGCCGTGGAGTGGGTTCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCATTGCTGTTTCTCATGGTTGCCCTGGAGTGGCAGCACGAGCATGCGGCCTTGTGGGTCTGGAGCCTACGAGGGTCGCAGAGATTCTCAAAGATCGTCCGTCTTGGTATCGCGATTGCCGAGCTGTAGATGTTCTAAACGTCTTGTCCACGGGAAATGGTGGAACGGTTGAATTAATTTACATGCAGATGTATGCTCTGACAACTTTGACATCAGCGCGGGACTTTTGGTTGCTGCGATACACATCTATTTTGGAGGATGGCAGTCTTGCGGTTAGTGAAAGATCACTAAACAACACTCTAAACGGTCCTAGCATGCCAGCAGTGAAGCATTTTGTTAGATCAGACATGCTACCTAGTGGTTATCTGATTAGACCATGTGAGGGAGGATCAATCATTCATATTGTTGACCATGTGGATTTGGAGCCCGGGAGCATACCAGAAGTGTTACGTCCACTATATGAATCGTCCCTGCTGCTTGCTCAAAGGTCCACAATGGCGGCTTTGCGTTATTTAAGGCAGATCTCTCAAGAAATATCTCAGCCAAATGTTGCAGGGTGGGGCAGGAGACCTGCAGCATTACATGCACTTGGTCAACGTTTGAGCAAGAGCTTCAACGAAGCAGTCAATGGTTTCTCAGATGATGGATGGTCTGTTTTAGACAGTGATGGCAGTAATGATGTCACAATACTGGTAAATTCATCTCTCAGCAAGGTTATGGGCGCAAATCCTTGTTATGCCAATGGCTTTCCTTCTATAAACAGTTCTGTATTGTGTGCCAAGGCATCCGTGTTATTACAGGATGTGCCCCCAGCAATGCTGCTGAGATTCTTGCGGGAACATCGGTCAGAGTGGGCAGACAGCGCTATTGATGCTTACTGTGCTGCCGCAATTAAAGCTGGTCCCTGTAGCTTGCCAGGGTCTCGACCAGGAAGCTTTGCTGGTCAAGTTATTCTTCCTTTAGCTCACACCAGTGAACATGAAGAATTTATGGAGGTCATTAAGTTCGAAAGTGTGGGGTATTACAGGGAGGACATCCCCATGACCAGCGATATCTTCCTTCTGCAACTCTGCAGTGGAGTAGAAGAGAAAGCCATTGGAACCAGTGCGGAACTCATGTTTGCTCCCATTGACTCCTCTTTTTCTGATGATGCTCCAACTATAGCTTCTGGTTTTCGTATCATTCCCCTTGATTCTGGACTGGATGCTGCTAGTCGAAACCGAACACTCGATCTTGCTTCTGCTTTGGAAGTTGGACCAACAGGAAATAAAATGGCTAGCGATAGTTCTAGCAATTCTGGAAGTACTAAATCTGTCATGACAATTGCATTCCAATTTGCCTTTGACATCCACTTTCAAGATAATATAGCGGCCATGGCTCGTCAGTATGTCCGAGGTATCATTGCATCTGTTCAAAGGGTAGCATTAGCACTTTCACCATCATGCTTTGGCAATCATACTGGTTTTCGGCTACCGCCTGGGACACCTGAGGAGCACACTCTTGCTCGATGGATCTGCCAGAGATACAGTTTCTATATGGGAGTTGAACTACTAAATCCTGAAGGCAGTGAACCCATCCTCAAATCTCTTTGGCATCACTCTGATGCAGTCTTGTGCTGCTCCTTGAAGACGCTGCCCGTTTTTACATTTGCAAATCAAGCTGGACTAGACATGCTTGAGACAACATGGGTTGCTCTTCAGGACATTACACTGGACAAAATATTTGATGACAATGGAAAGAAAACTCTCTGCTCCGATTTCCCACAGATAATGCAGCAGGTATAG 2385 0.4704 MRTVSSSCEDGSDSPKGVMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESASLQAVNRKLSAMNKLLMEENERLQKQVSQLVYENSFFRQKTQNTTLATTDTSCESVVTSVQPHLTPQYPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAVSHGCPGVAARACGLVGLEPTRVAEILKDRPSWYRDCRAVDVLNVLSTGNGGTVELIYMQMYALTTLTSARDFWLLRYTSILEDGSLAVSERSLNNTLNGPSMPAVKHFVRSDMLPSGYLIRPCEGGSIIHIVDHVDLEPGSIPEVLRPLYESSLLLAQRSTMAALRYLRQISQEISQPNVAGWGRRPAALHALGQRLSKSFNEAVNGFSDDGWSVLDSDGSNDVTILVNSSLSKVMGANPCYANGFPSINSSVLCAKASVLLQDVPPAMLLRFLREHRSEWADSAIDAYCAAAIKAGPCSLPGSRPGSFAGQVILPLAHTSEHEEFMEVIKFESVGYYREDIPMTSDIFLLQLCSGVEEKAIGTSAELMFAPIDSSFSDDAPTIASGFRIIPLDSGLDAASRNRTLDLASALEVGPTGNKMASDSSSNSGSTKSVMTIAFQFAFDIHFQDNIAAMARQYVRGIIASVQRVALALSPSCFGNHTGFRLPPGTPEEHTLARWICQRYSFYMGVELLNPEGSEPILKSLWHHSDAVLCCSLKTLPVFTFANQAGLDMLETTWVALQDITLDKIFDDNGKKTLCSDFPQIMQQV* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01014 794 SUPERFAMILY Bet v1-like 166 376 - -
Pte3g01014 794 Gene3D - 202 377 IPR023393 -
Pte3g01014 794 Pfam MEKHLA domain 700 793 IPR013978 -
Pte3g01014 794 CDD homeodomain 23 83 IPR001356 GO:0003677
Pte3g01014 794 MobiDBLite consensus disorder prediction 1 22 - -
Pte3g01014 794 CDD bZIP 75 114 - -
Pte3g01014 794 SUPERFAMILY Homeodomain-like 22 87 IPR009057 -
Pte3g01014 794 FunFam Homeobox-leucine zipper protein REVOLUTA 23 78 - -
Pte3g01014 794 ProSiteProfiles 'Homeobox' domain profile. 18 82 IPR001356 GO:0003677
Pte3g01014 794 Pfam START domain 167 374 IPR002913 GO:0008289
Pte3g01014 794 Pfam Homeodomain 23 81 IPR001356 GO:0003677
Pte3g01014 794 CDD START_ArGLABRA2_like 161 375 - -
Pte3g01014 794 Gene3D - 16 90 - -
Pte3g01014 794 SMART HOX_1 20 86 IPR001356 GO:0003677
Pte3g01014 794 Coils Coil 88 119 - -
Pte3g01014 794 ProSiteProfiles START domain profile. 157 370 IPR002913 GO:0008289
Pte3g01014 794 SMART START_1 166 375 IPR002913 GO:0008289
Pte3g01014 794 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 18 793 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01014 Pte-Chr3 8675837 8682811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01014 19 793 Homeobox Transcription Factor Family AT4G32880 77.051 0.0 1231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte3g01014 START 7.8e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01014 K09338 - qsa:O6P43_019487 1311.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01014 3 8675837 8682811 Pte3g01014 3 8675837 8682811 RCT