Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01008 ATGTCCAAACTAACCCTCTTCTTCCCAGAGATCACACTCACTCTCTTACTCTTGCACTTCGTCTGCCTATCCTTGCAAGTGATTTCACATATTACAATCACAGAGCAAATTATCCTACTGAACCTGAAAGAGCAACTGGGTAATCCACCATCGATTCAATCATGGAACTCTTCATCCTCACCTTGTGACTGGCCGGAGATCTGGTGCTCTGGAGGCACAGTGACTGGAGTTTTACTTGGAAACAAAGGTATTAATAAGACAATCCCACCAACGTTATGCAACCTTGAAAACCTGACTGAGTTAGACCTTGCTTACAATGACATACCTGGTGAATTCCCAAGATTGCTGTACAACTGTTCTAAGCTTCAAATGATCAACCTGTCACAGAATTATTTTGTGGGTCCAATTCCTCAAGACGTACATAGACTCCACGCTCTCAGGTTTCTGGACCTCAGTGGCAACAATTTCTCAGGTGATATTCCACCAGCCATTGGGAAACTAACTGAGTTACAAACGTTGAACCTCAATCAGAATGAGTTTAATGGTACGTTTCCCAAGGAGATTGGAAACTTGTCCAATCTTGAATATCTGGCCATGGCTTATAACTATAAATTTGTTCCAATGGAGATCCCACCTGAGTTTGGAAATTTGAGGAAGCTAAAAGTCATGTGGCTGAAAAGTTCAAATTTGATGGGAGAAATCCCACAAAGTTTTTCCAATATGACAAGCCTCGAGTGGTTGGACCTTTCAACGAACAGTTTGACAGGTCAAATTCCCAAAGGGTTGTTTTTGTTGAGCAATTTGAGCCGTGTATATCTCTTCAACAATAGATTGTCTGGTGAGATACCCAGTTCGATTGAGGCCTTGAATCTGAATCAAATCGATCTTGCAATGAATAATTTGACAGGTTCAATCCCTGAAAGTGTTGGTAAGTTGAAGAGTTTGACAGTGTTGAGTCTGTATATGAATCAGTTAACAGGACAAATTCCATGGAGTGTAGGCGAAATTCCATCTCTGATGTATTTTAAGGTCTTCAGGAACAACTTGAATGGAACTTTGCCACCAGAACTAGGGAGATATTCTATGCTTAAAACAGTTGAAGTTTCAGACAATCAACTAACTGGTGAACTACCTCCACACTTATGTGATGGCGGTGCTTTGCAAGGAGTGGTTGCTTTCTCCAACATGCTTAGCGGATTGTTGCCAGAAGGGCTTGGAAATTGTACTGCTCTACGCACAATTCAGGTTTACAACAATAACTTTTCTGGTGAGCTCCCTTTTGGTGTTTGGACATCGTGGAATCTATCAAGCTTAATGCTGAGCAGAAATTCATTTTCTGGTCAACTTCCAGATAAGTTTGCTTGGAATCTATCCAGAATTGAGATAGATAACAACAAATTTTCTGGTCCTATTCCTACTGGAATTTCTTCAGCAATAAACCTGTCTGTTTTTATAGCCAGCAACAATTTACTTTCAGGCGAGATCCCATTGGAACTTACAGATCTTCGTCAGCTCAGTGTTCTCATGCTTGATAGTAATCAACTTTCAGGGGCACTTCCATCTGAAATAGTGTCCTGGAAGTCACTGACTACTTTAAATCTTTCAAGAAACAACCTTTCAGCACAAATACCAATAGCATTATGTCAGCTACCTATTCTCTACTTGGACTTATCAGACAACAAACTATCTGGAGAGATTCCACCTCACCTTGGCCAGTTAAGGCTTGCTTCCCTCAATTTGTCCTTCAATAAGCTTTTTGGGAAAGTCCCAAAAGAGTTTGATAACCTTGCGTATGAAAACAGTTTCAAGGGAAACCCTTCTTTATGTGCAGATGATATAGTTCTTGGGATTTCAATCTGTCACACAGAAGTCTCCCAATCAAGCAAATCATCTCCTAGGTTCCTTGCTTTAATACTTTGTATCATAATCGTCGCCTTCATGGCGACTGTCTCATTGTATTTGTATTGGCTATTACATGATAGGAACAAAAACCAAGTTCGGCATAGCCACTCAACATGGAAGCTTACCTCTTTCCAGAGATTGGACTTGAGTGAATGGAGCATTCTGTCAAACTTGACTGATGATAACCTTATAGGAAGTGGGGGATCTGGAAAAGTGTACCGTATTGCTACTTGTCATCCTGGGGAATTCATTGCTGTCAAAAAGATCTGGAACAGCAGGAGAATGGATTGCAAACTAGAAAAAGAATTTAATTCTGAGGTTGAAATTTTGGGTTCAATCCGCCATGCCAATATAGTAAAGCTTTTGTGTTGCATTTCCAGTGAGGACTCAAAGCTTCTTGTCTATGAGTACATGGAAAATCAAAGCCTGGATATATGGCTTCATAGGAATAAGAGAGTCCACAACCCCGCAGCAGCATTGAGTTCAGTCAACAACCAACATTCCCTGAATTGGCCGATGAGGTTGAAAATTGCAATTGGAGCTGCACAAGGTCTATGTTACATGCATCATGACTGCTCTCCACCAATCATTCACCGAGACATCAAGTCGAGTAACATCTTGCTGGATTCAGAATTCAGGGCAACAGTAGCAGATTTTGGCTTGGCCAAGATGTTGGTTAAGCATGGAGAACCGTGCTCATTGTCAGCTATAGCTGGCTCCTTTGGTTATATTGCACCTGAATACACATATTCATTAAAGGTAAATGAGAAGGTTGACGTGTATAGTTTTGGGGTTGTACTGCTGGAGCTTGTGACAGGAAGAGAAGCAAATTGTGGGAACGAGAATGCAAGCCTAGCAGATTGGGCATGGCAGTATTACAGTGAGGGAAAGCCTATGAGTGAAGCATTGGATGCAGAAATTAAGCAAGCATGTTACATAGAAGAGATGTCTGCCGTGTTCAAACTAGGCCTTGCTTGTACAAACGCCTCGCCCTCATGTAGGCCTTCCATGAAAGAGAATCTGCAGATTCTTCATAGGTGCTGCAGCCAAGATGGTCTTCAAGGAAATAAGATGGCTGCCGAGATTGATATCGCTCCTCTTATTGAAGATGCTACCTATATCTCCAGTTACAAGTACTGCAATGTCACAAATGAAGATGATGAAAGCTTAATACTGTATAGTGTGTGA 3090 0.4133 MSKLTLFFPEITLTLLLLHFVCLSLQVISHITITEQIILLNLKEQLGNPPSIQSWNSSSSPCDWPEIWCSGGTVTGVLLGNKGINKTIPPTLCNLENLTELDLAYNDIPGEFPRLLYNCSKLQMINLSQNYFVGPIPQDVHRLHALRFLDLSGNNFSGDIPPAIGKLTELQTLNLNQNEFNGTFPKEIGNLSNLEYLAMAYNYKFVPMEIPPEFGNLRKLKVMWLKSSNLMGEIPQSFSNMTSLEWLDLSTNSLTGQIPKGLFLLSNLSRVYLFNNRLSGEIPSSIEALNLNQIDLAMNNLTGSIPESVGKLKSLTVLSLYMNQLTGQIPWSVGEIPSLMYFKVFRNNLNGTLPPELGRYSMLKTVEVSDNQLTGELPPHLCDGGALQGVVAFSNMLSGLLPEGLGNCTALRTIQVYNNNFSGELPFGVWTSWNLSSLMLSRNSFSGQLPDKFAWNLSRIEIDNNKFSGPIPTGISSAINLSVFIASNNLLSGEIPLELTDLRQLSVLMLDSNQLSGALPSEIVSWKSLTTLNLSRNNLSAQIPIALCQLPILYLDLSDNKLSGEIPPHLGQLRLASLNLSFNKLFGKVPKEFDNLAYENSFKGNPSLCADDIVLGISICHTEVSQSSKSSPRFLALILCIIIVAFMATVSLYLYWLLHDRNKNQVRHSHSTWKLTSFQRLDLSEWSILSNLTDDNLIGSGGSGKVYRIATCHPGEFIAVKKIWNSRRMDCKLEKEFNSEVEILGSIRHANIVKLLCCISSEDSKLLVYEYMENQSLDIWLHRNKRVHNPAAALSSVNNQHSLNWPMRLKIAIGAAQGLCYMHHDCSPPIIHRDIKSSNILLDSEFRATVADFGLAKMLVKHGEPCSLSAIAGSFGYIAPEYTYSLKVNEKVDVYSFGVVLLELVTGREANCGNENASLADWAWQYYSEGKPMSEALDAEIKQACYIEEMSAVFKLGLACTNASPSCRPSMKENLQILHRCCSQDGLQGNKMAAEIDIAPLIEDATYISSYKYCNVTNEDDESLILYSV* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01008 1029 FunFam Receptor-like protein kinase HSL1 672 771 - -
Pte3g01008 1029 SUPERFAMILY RNI-like 290 593 - -
Pte3g01008 1029 CDD STKc_IRAK 698 978 - -
Pte3g01008 1029 Gene3D Ribonuclease Inhibitor 34 142 IPR032675 -
Pte3g01008 1029 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 385 623 - -
Pte3g01008 1029 Gene3D Ribonuclease Inhibitor 209 362 IPR032675 -
Pte3g01008 1029 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 284 381 - -
Pte3g01008 1029 FunFam Kinase family with leucine-rich repeat domain-containing protein 772 995 - -
Pte3g01008 1029 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 209 973 - -
Pte3g01008 1029 Gene3D Ribonuclease Inhibitor 363 626 IPR032675 -
Pte3g01008 1029 Gene3D Phosphorylase Kinase; domain 1 674 771 - -
Pte3g01008 1029 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 33 188 - -
Pte3g01008 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Pte3g01008 1029 SMART serkin_6 692 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01008 1029 Pfam Leucine rich repeat N-terminal domain 39 70 IPR013210 -
Pte3g01008 1029 ProSitePatterns Protein kinases ATP-binding region signature. 698 722 IPR017441 GO:0005524
Pte3g01008 1029 Gene3D Ribonuclease Inhibitor 143 208 IPR032675 -
Pte3g01008 1029 SUPERFAMILY Protein kinase-like (PK-like) 688 981 IPR011009 -
Pte3g01008 1029 SUPERFAMILY L domain-like 38 378 - -
Pte3g01008 1029 Pfam Protein kinase domain 694 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01008 1029 SMART LRR_typ_2 167 191 IPR003591 -
Pte3g01008 1029 SMART LRR_typ_2 527 550 IPR003591 -
Pte3g01008 1029 SMART LRR_typ_2 502 526 IPR003591 -
Pte3g01008 1029 SMART LRR_typ_2 95 119 IPR003591 -
Pte3g01008 1029 SMART LRR_typ_2 143 166 IPR003591 -
Pte3g01008 1029 SMART LRR_typ_2 241 265 IPR003591 -
Pte3g01008 1029 ProSiteProfiles Protein kinase domain profile. 692 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01008 1029 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 189 282 - -
Pte3g01008 1029 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Pte3g01008 1029 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Pte3g01008 1029 Gene3D Transferase(Phosphotransferase) domain 1 772 999 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01008 Pte-Chr3 8607017 8610985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01008 35 1002 Receptor kinase-like Gene Family AT5G25930 55.236 0.0 1059
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte3g01008 Pkinase 3.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01008 - - qsa:O6P43_019495 1261.51