Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01005 ATGGCGATCGCTACAGAGAATCTACCACAAGAGAAGGCTTCTTCAGAGACTTCAGCGGTGGAGAAAGGAAGGTGGTTACTCAATGACTTTGACATTGGAAAGCCTCTTGGAAGGGGAAAGTTTGGCCACGTCTATTTAGCTAGAGAGAAGAGGAGCAACCACATTGTGGCACTCAAAGTCCTGTTTAAGAGCCAACTGCAACAATCTCAGGTTGAGCATCAGCTTCGGCGGGAAGTTGAAATACAAAGCCATCTAAGACATCCCAACATTTTACGCCTATATGGTTATTTTTATGATCAAAAACGAGTTTATTTGATCCTAGAACATGCTCCAAAAGGTGAACTATACAAGGAACTACAGAAATGCAAATACTTCAGTGAAAGACGCTCAGCTACCTATGTTGCATCACTAGCACGAGCTCTTATTTATTGCCACGGAAAGCATGTAATACATAGAGACATCAAACCAGAAAACCTTCTTATCGGTGCACAGGGCGAACTGAAGATAGCAGATTTTGGATGGTCTGTACATACATTTAATCGCAGGAGAACCATGTGTGGTACACTAGATTACCTTCCCCCCGAGATGGTTGAAAGTGTAGAGCACGATGCGAGTGTGGATATATGGAGTCTTGGAATCCTCTGCTATGAGTTTCTTTACGGAGTCCCACCTTTTGAGGCTATGGAGCATTCTGATACGTATAGACGGATACTACAAGTAGATCTCAAGTTCCCTCCCAGACCTATTATCTCTTCTGCTGCAAAGGATCTCATCAGTCAGATGCTTGTGAAGGATTCATCTCAACGTCTACCTTTACCTAAACTTCTTGAGCATCCATGGATCGTTCAGAATGCGGAGCCCTCAGGAATTTACAGGGGTTGA 882 0.4365 MAIATENLPQEKASSETSAVEKGRWLLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEHAPKGELYKELQKCKYFSERRSATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGILCYEFLYGVPPFEAMEHSDTYRRILQVDLKFPPRPIISSAAKDLISQMLVKDSSQRLPLPKLLEHPWIVQNAEPSGIYRG* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01005 293 FunFam Aurora kinase A 22 113 - -
Pte3g01005 293 SUPERFAMILY Protein kinase-like (PK-like) 17 285 IPR011009 -
Pte3g01005 293 Pfam Protein kinase domain 32 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01005 293 Gene3D Transferase(Phosphotransferase) domain 1 114 289 - -
Pte3g01005 293 SMART serkin_6 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01005 293 CDD STKc_Aurora 29 282 - -
Pte3g01005 293 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 10 289 IPR030616 GO:0004672
Pte3g01005 293 ProSiteProfiles Protein kinase domain profile. 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01005 293 FunFam serine/threonine-protein kinase Aurora-1 114 289 - -
Pte3g01005 293 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Pte3g01005 293 PIRSF ILK 5 277 - -
Pte3g01005 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Pte3g01005 293 Gene3D Phosphorylase Kinase; domain 1 18 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01005 Pte-Chr3 8590274 8592438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01005 21 287 CBL-interacting serine-threonine protein kinases AT5G10930 35.766 9.29e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Pte3g01005 Pkinase 5.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01005 K08850 - qsu:112003432 566.614