Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00993 ATGTCAGCCACCTTTGCTTCTCGTAAACTCCCTTCTCTCTTCTACCTTCTCTGTTTCCTCTGTTTACTCTCCGGAGTCAAATCCGACGAACTCCCGAGTCTAATGGCGTTGAAATCTGCACTTCAGAGTTCAAATTCGCGTGTCTTTGCCTCGTGGACGACTACCAGTGCTCCCTCCAAATTCACTGGAGTCACTTGCAATTCAGACGGTTCCGTTAGAGAAATCGAACTTTCAAATACAAACCTTTCTGGGATTCCTCCTTTTGATTCGATATGCCAGTTGAAATCACTTGAGAAACTGTCGCTGGGTTTCAACTCCTTGTCTGGTAGAGTTACAGATGATCTGAACAACTGCGTGAAATTGAAGTACTTAGACTTGGGTAACAACTTTTTCACTGGACCAGTCCCTGACATCTCTTCACTCAGTGAATTGCAGTATCTGCACTTGAACAACAGTGGATTTTCAGGTACCTTTCCCTGGAAGGCACTCCTCAACATGACTGGTCTCTTGCAGTTGAGCGTAGGAGACAACCCTTTCGAGTCAACTCCATTTCCGAAAGAGTTATTGAATCTCAAGAAACTGAATAGGCTCTACCTCACGAATTGCACCATAAAAGGGGAGATACCTGCTGGGTTAGGAGACCTGTCGGAGTTGGTGAGTTTTGAGGTTTCTGACAACTCGTTGACCGGCAACATTCCAGCTGAGATTGTAAAGCTGACCAATCTCGTGGAGCTTGAGCTTTACAACAATACAATTACCGGTCAAATTCCTAGTGGGTTTAGAAACCTCACAAAACTTGAGTTGTTTGATGCTTCACAGAATTTACTTGAGGGTGATCTGTCTGAGTTGGGATACTTGAATAATCTAGTTACTCTGCAACTTTTTCAAAACAATATCACCGGGGAAATTCCTGTGGAGTTTGGAGAGTTCAGAAAACTTGTCAACCTGTCTCTGTATCAGAACCAATTGACGGGTCCTGTACCTGAAAAGATTGGCTCTTGGGCCGACTTTGATTACATTGACGTATCTGAAAATTTTCTGACAGGTCCAATTCCACCCTATATGTGCAACAAGGGAACTATGAGAGGACTTCTTATGCTTCAAAACAATTTTACTGGTGCAATTCCAGCCAGTTACGGCAACTGTTCATCTTTGCGTAGGTTTAGAGTCAGCAACAACTCGCTCTCAGGTACCGTGCCTCCTGGAATATGGGGTTTGCCCAAAGTGGAAATCATTGATATCGAGTTGAATCACTTGGAAGGTACAATAACACCAGAAATTCAGAATGCCAAGAGCCTTGGAGAAATTTATTGTAGAAAGAATCGATTAGGTGGTGAAATCCCTGAAGAGATATCAAAAGCTACTTCACTATCAGTAATTGATCTTAGTGAGAATCATTTTTCTTTGAAAATTCCAGAGGGAATAGGTGAGCTCAAACATCTAACCACTCTCCATTTACAAAGCAACCAGTTCAGTGGGTTTATACCGGACTCATTAGGTTCTTGTACTTACCTTAACGATGTTAACATTGCTGAAAATTCACTCGCTGGCGAAATCCCATCATCTTTAGGTTCTTTGCCAAGCCTCAATGCTCTAAATTTATCTCAGAATAAAATATCTGGACAAATCCCTCAGAGTTTTAAGTCACTTAGGCTAAGCCTTCTTGATCTGTCAAATAACCAATTATACGGTCCAATACCATCTTTCCTGTCCATAGAAGCCTACAATGGAAGCTTTACAGGAAATCCTGGTCTATGCAATATTGGCTTGACGGGGTCATTCAAGAGTTGTTCTACAACAAGTTCAGGCATGTCCAAGCATGTCCACACACTCATCATTTGCTTCGTTGTAGGTTTGGTGCTGTTGTTGGTACTTCTGACTTCCTTGATCTTCTTAAAGAAGAAGGTCAAACAAAGACAACGTTCACTAAAGGAAGAATCCTGGAACATGAAGTCATTCCACGTGGTGAGCTTCACAGAAGATGAGATTCTAGATGCCATTACTCAAGAGAATCTGATTGGAACGGGAGGTTCTGGCAATGTGTATAAAGTTCAGCTTCCAAATGGAAAAGAGCTTGCAGTTAAGCATATATGGAATGCTGACTTCCACGAGAGGAAAAAGAGTGGAAGCACTGTTCCCATGCTTGGCAAGCGTAGTGGGAAATCAAAGGAATTTGATGCAGAGGTGCAGGCATTAAGCTCAATTAGACATGTTAACGTGGTGAAACTGTACTGTAGTATTACCAGTGAGGATTCAAGTCTGTTGGTGTATGAGTATTTGCCAAATGGGAGCTTGTGGGATAGACTTCACTCGTCCCAAAAGCTTGAGCTCGATTGGGAGACAAGGTATGAAATAGCATTGGGTGGAGCCAAAGGTTTGGAGTATCTTCATCATGGTTATGAGAGGCCAGTGATCCACAGGGACGTCAAGTCCAGTAACATACTGTTAGATGAGCTATTGAAGCCAAGGATTGCGGACTTTGGGCTTGCAAAAATCGTTCATGTCAATAGTGGCAAAGATTCAACCCATGTCATTGCGGGAACTCTAGGCTACATAGCCCCCGAATATGGATATAGCAGCAGAGTAAATGAGAAGAGTGACGTGTACAGCTTTGGAGTTGTGTTAATGGAGTTGGTGACTGGAAAAAGGCCTATAGAACCAGAGTTTGGGGAGAACAAAGATATTGTCAACTGGGTATGCAGCAACTTGAAAACCAGGGATAGCATATTGAACGTGGTGGTGGACTCTAGATTGTCAGAGGCATGCAAAGAAGACGCTGTTAAGGTGTTGAGGATAGCCATTATTTGCACAACAAGGGTTCCAAGCTTGAGGCCCACAATGAGAACTGTGGTCCAAATGCTGGAAGAGGCTGAGCCCAGTAAATTGGTGGATATTGTCATCAGCAAAGATAGAACAGCTAAGGGAATGGACATGGGGGAAAAAGAAAAGGCTTGA 2955 0.4298 MSATFASRKLPSLFYLLCFLCLLSGVKSDELPSLMALKSALQSSNSRVFASWTTTSAPSKFTGVTCNSDGSVREIELSNTNLSGIPPFDSICQLKSLEKLSLGFNSLSGRVTDDLNNCVKLKYLDLGNNFFTGPVPDISSLSELQYLHLNNSGFSGTFPWKALLNMTGLLQLSVGDNPFESTPFPKELLNLKKLNRLYLTNCTIKGEIPAGLGDLSELVSFEVSDNSLTGNIPAEIVKLTNLVELELYNNTITGQIPSGFRNLTKLELFDASQNLLEGDLSELGYLNNLVTLQLFQNNITGEIPVEFGEFRKLVNLSLYQNQLTGPVPEKIGSWADFDYIDVSENFLTGPIPPYMCNKGTMRGLLMLQNNFTGAIPASYGNCSSLRRFRVSNNSLSGTVPPGIWGLPKVEIIDIELNHLEGTITPEIQNAKSLGEIYCRKNRLGGEIPEEISKATSLSVIDLSENHFSLKIPEGIGELKHLTTLHLQSNQFSGFIPDSLGSCTYLNDVNIAENSLAGEIPSSLGSLPSLNALNLSQNKISGQIPQSFKSLRLSLLDLSNNQLYGPIPSFLSIEAYNGSFTGNPGLCNIGLTGSFKSCSTTSSGMSKHVHTLIICFVVGLVLLLVLLTSLIFLKKKVKQRQRSLKEESWNMKSFHVVSFTEDEILDAITQENLIGTGGSGNVYKVQLPNGKELAVKHIWNADFHERKKSGSTVPMLGKRSGKSKEFDAEVQALSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHSSQKLELDWETRYEIALGGAKGLEYLHHGYERPVIHRDVKSSNILLDELLKPRIADFGLAKIVHVNSGKDSTHVIAGTLGYIAPEYGYSSRVNEKSDVYSFGVVLMELVTGKRPIEPEFGENKDIVNWVCSNLKTRDSILNVVVDSRLSEACKEDAVKVLRIAIICTTRVPSLRPTMRTVVQMLEEAEPSKLVDIVISKDRTAKGMDMGEKEKA* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00993 984 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Pte3g00993 984 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Pte3g00993 984 SMART serkin_6 667 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00993 984 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 760 970 - -
Pte3g00993 984 SUPERFAMILY L domain-like 24 233 - -
Pte3g00993 984 FunFam Receptor-like protein kinase HAIKU2 650 759 - -
Pte3g00993 984 FunFam Leucine-rich repeat receptor-like protein kinase TDR 283 599 - -
Pte3g00993 984 Pfam Leucine Rich Repeat 120 139 IPR001611 GO:0005515
Pte3g00993 984 SUPERFAMILY L domain-like 188 432 - -
Pte3g00993 984 Gene3D Ribonuclease Inhibitor 27 183 IPR032675 -
Pte3g00993 984 Gene3D Phosphorylase Kinase; domain 1 631 759 - -
Pte3g00993 984 FunFam Probable inactive receptor kinase RLK902 27 183 - -
Pte3g00993 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Pte3g00993 984 SMART LRR_typ_2 94 118 IPR003591 -
Pte3g00993 984 SMART LRR_typ_2 239 262 IPR003591 -
Pte3g00993 984 SMART LRR_typ_2 478 502 IPR003591 -
Pte3g00993 984 SMART LRR_typ_2 526 549 IPR003591 -
Pte3g00993 984 SMART LRR_typ_2 191 215 IPR003591 -
Pte3g00993 984 SUPERFAMILY Protein kinase-like (PK-like) 652 955 IPR011009 -
Pte3g00993 984 CDD STKc_IRAK 673 956 - -
Pte3g00993 984 Gene3D Ribonuclease Inhibitor 357 604 IPR032675 -
Pte3g00993 984 Pfam Protein kinase domain 669 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00993 984 Gene3D Ribonuclease Inhibitor 283 356 IPR032675 -
Pte3g00993 984 SUPERFAMILY L domain-like 368 568 - -
Pte3g00993 984 Gene3D Transferase(Phosphotransferase) domain 1 760 975 - -
Pte3g00993 984 ProSiteProfiles Protein kinase domain profile. 667 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00993 984 FunFam Leucine-rich receptor-like protein kinase family protein 184 282 - -
Pte3g00993 984 Pfam Leucine rich repeat 505 562 IPR001611 GO:0005515
Pte3g00993 984 Gene3D Ribonuclease Inhibitor 184 282 IPR032675 -
Pte3g00993 984 PANTHER LEUCINE RICH REPEAT KINASE 2 284 958 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00993 Pte-Chr3 8469565 8473256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00993 14 974 Receptor kinase-like Gene Family AT1G09970 62.629 0.0 1186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte3g00993 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00993 - - qsa:O6P43_015409 1392.87