Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00986 ATGGAGAACTACTGCTCATCTTACCATGACTCTCGGAGCTCTTCCCCGCGCTCCCGTGAAGTGGACACGGATAATCACTCCCGGGACGAACCTCTGGCTGCTAACACTACCGCCGCCACGATCGCCCCAAATACGGGAACCGCCGGCGCCACACCCGCAACCAACTGTAGCAACTTCAAAGTCAAACTCATGTGTAGCTATGGTGGCAAAATTCAACCCAGACCTCATGATAACCAACTTGCCTACATTGGTGGGGATACTAAGATTTTGGCTGTGGATCGTCATATCAAGTTTGCTGCTCTTATGGCGAAGCTTTCTTGTTTCTCGGATAATGATGTTTATTTCAAATATCAACTACCAGGTGAGGATCTTGATGCCTTGATATCTGTAACCGACGATGAGGATCTTGAACATATGATGGTTGAGTACGGACGCTTGTGTCGTGCTTCTGCTAAGCCCGCTAGGTTGAGGTTGTTTCTCGTCCCTTTCAATTCTTCTGCGCCGACAAGTTTTGTTGCCGTCGAGACCAAAGCCGAGCGGCAATGGTTTGTGGAGGCACTCAATTCTGTTCAGATTCATCCTCAGGATGGTTCTCCGCCGGCGTCTGTTTCGGCCAGCAACCCCGATTTTCTGTTCGGGCTTGATAAAGGGTGCTCGGTCATTCCCGTCCCGAAGTTGCTTGAGTCTGCGCCTCTTCCTGCAGTGCATGCAGTGACAGGGAAGGATTTTCCGGCAAGTTCGGATAGTGGATCAGATGACCGCCACGGGGTTGGTGAACAGGTGGTCTCCCAAGGCGAAACTCAGAAGCAGATCCAAGATTTGCAGAAGCTACAGTTGGCAAGCAATGGGCAGAATGTACAGAGGAGAAGTGATGAAGCAATTGCCAATGGGAATGGTAGAGCTTGCACGGCGGACTATTGCTCTCAGGGAAACCAAGAGAGAGTCGCAACTCCTCCTGCTCCTGTTCAGGTACAACTGCCAGCGGCAACATATGTGCCTGAGAGGCATATGACTACCTCCGGCTATCCTGTGACTCCAGCTGCCGGAACTGACCAACCGGTGTATCTCATTCCAACACAAGCAGGAATGTTTCAAGCTATGGCTTTGAAACCTGTTACTGATCCAGTGAGCCAACCTTATTATGGAATGCCAAGAATGGTCGCAACAGAAATGTCCAATGCAGCACCACCTTCACTTTCTCATTCGCAAGCTAAGGTTGGAGCTTACAAAGAAAACACTGGAACGGGTCAACAGAAGGTTGGGGCGGCCGAGACTTGCTTTCTGGTTGGGTATGACAATGCAGGCAGACAGGTTTACTATATGGCATCTCCAGTTGGGTTTATGCCACAATACCAGGTGATGTCGACTGGGATTGATGGAAGGCGAGGAGGTAACCTCGTTGGTGGTGCTTTGAATTCAGAGGGTAAGGTTGTTGTTAACAATGTTTCTCAAGCTTCTTGA 1461 0.5003 MENYCSSYHDSRSSSPRSREVDTDNHSRDEPLAANTTAATIAPNTGTAGATPATNCSNFKVKLMCSYGGKIQPRPHDNQLAYIGGDTKILAVDRHIKFAALMAKLSCFSDNDVYFKYQLPGEDLDALISVTDDEDLEHMMVEYGRLCRASAKPARLRLFLVPFNSSAPTSFVAVETKAERQWFVEALNSVQIHPQDGSPPASVSASNPDFLFGLDKGCSVIPVPKLLESAPLPAVHAVTGKDFPASSDSGSDDRHGVGEQVVSQGETQKQIQDLQKLQLASNGQNVQRRSDEAIANGNGRACTADYCSQGNQERVATPPAPVQVQLPAATYVPERHMTTSGYPVTPAAGTDQPVYLIPTQAGMFQAMALKPVTDPVSQPYYGMPRMVATEMSNAAPPSLSHSQAKVGAYKENTGTGQQKVGAAETCFLVGYDNAGRQVYYMASPVGFMPQYQVMSTGIDGRRGGNLVGGALNSEGKVVVNNVSQAS* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00986 486 MobiDBLite consensus disorder prediction 1 47 - -
Pte3g00986 486 MobiDBLite consensus disorder prediction 13 29 - -
Pte3g00986 486 SUPERFAMILY CAD & PB1 domains 76 167 - -
Pte3g00986 486 MobiDBLite consensus disorder prediction 30 47 - -
Pte3g00986 486 MobiDBLite consensus disorder prediction 241 269 - -
Pte3g00986 486 SMART PB1_new 75 163 IPR000270 GO:0005515
Pte3g00986 486 Pfam PB1 domain 76 161 IPR000270 GO:0005515
Pte3g00986 486 CDD PB1_UP2 64 160 - -
Pte3g00986 486 Gene3D - 81 162 - -
Pte3g00986 486 PANTHER OS05G0427100 PROTEIN-RELATED 8 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00986 Pte-Chr3 8372360 8374283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00986 61 195 MAP Kinase Kinase Kinase AT1G04700 41.216 1.60e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00986 - - qsa:O6P43_019535 534.258