Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00985 ATGGTCGTGAGGAAAGTAGGCAAGTATGAGATTGGAAGGACAATCGGGGAAGGAACCTTCGCTAAAGTTAAGTTCGCTCAGAACACGGAGACCGGTGAGAGTGTCGCCATGAAAGTCCTCGATCGTAGCACCATCATCAAGCACAAGATGGTCGAACAGATCAAGAGAGAGATTTCTATAATGAAACTAGTCAGGCATCCGTATGTTGTTCGGCTACATGAGGTACTTGCAAGCCGTACTAAGATTTATATCATATTGGAATACATTACAGGCGGTGAACTGTTTGACAAAATAGTACACCATGGGCGTGTAAGCGAAGCAGAATCCAGAAGATACTTTCAGCAGCTTATTGATGGAGTAGAATATTGCCACAGTAAAGGAGTTTATCACAGGGATTTAAAGGTTAAGTGCAATGTGGAAGGTCTAATTCGTATTCTGGGTAGTTGCTGTTTTCATTTTCCTCACTTTTCATTTACTTCTCTTTCTTTGCAGCCAGAAAACCTCTTGCTTGATTCCCTAGGGAATATAAAAATTTCAGATTTTGGTCTAAGTGCATTGCCAGAACAAGGAGTCAGCCTCTTGCGTACAACTTGTGGAACTCCGAACTACGTAGCACCTGAGGTGCTGAGTCACAAGGGTTATAATGGTGCGGTTGCTGATGTTTGGTCTTGTGGGGTCATCCTCTATGTTTTGATGGCTGGATATCTTCCGTTTGATGAGCTAGATCTCACCACTTTATATAGTAAGATTGAGAATGCAGAGTACACTTGCCCTTCTTGGTTTCCCTTGGGAGCAAAATCTTTAATCAGTAGAATATTGGATCCTAATCCTGAAACGCGTATTACCATTGAGCAGATAAGAAATGATGAGTGGTTTCAGGTAAACTATGTTCCTGTGAAACCCATTGAGTATGAAGATGTAAACCTGGATGATGTGAATGCAGCTTTTGAAGAAGCTGAGGAGCAAAGGTCTATTGAACAATGTGGAAATGAGGACATGGGTCCTTTAATTCTTAATGCATTTGACTTGATCATTCTATCACAAGGCCTGAACCTTGCAACACTGTTCGACCGTGGTCAGGACTCTATGAAGTATCAGACCCGCTTCGTTTCCAGGAAACCAGCAAAGGTGGTCCTGTCAAGCATGGAAGTTGTGGCTCAATCAATGGGGTTTAAGACACATATTCGAAACTACAAGATGCGAGTAGAGGGTACCTCCACCAGTCAAGCTTCTCTATTTTCAGTCATATTGGAAATTTTTGAGGTTGCTCCTTCATTTTTAATGGTAGACATTCAAAAAACATCTGGAGATACTGGTGAATACATGAAGTTCTACAAGAACTTCTGTAGCAATCTTGAGGATATCATCTGGAAGCCACCTATTGAATCCAGCAAGTCGAGGATCGCCAAGACTAAAAGCAAAAGGCGTTAA 1431 0.4193 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVEQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEYITGGELFDKIVHHGRVSEAESRRYFQQLIDGVEYCHSKGVYHRDLKVKCNVEGLIRILGSCCFHFPHFSFTSLSLQPENLLLDSLGNIKISDFGLSALPEQGVSLLRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYVLMAGYLPFDELDLTTLYSKIENAEYTCPSWFPLGAKSLISRILDPNPETRITIEQIRNDEWFQVNYVPVKPIEYEDVNLDDVNAAFEEAEEQRSIEQCGNEDMGPLILNAFDLIILSQGLNLATLFDRGQDSMKYQTRFVSRKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGTSTSQASLFSVILEIFEVAPSFLMVDIQKTSGDTGEYMKFYKNFCSNLEDIIWKPPIESSKSRIAKTKSKRR* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00985 476 Pfam NAF domain 335 393 IPR004041 GO:0007165
Pte3g00985 476 SUPERFAMILY Protein kinase-like (PK-like) 6 293 IPR011009 -
Pte3g00985 476 FunFam Non-specific serine/threonine protein kinase 332 458 - -
Pte3g00985 476 ProSiteProfiles Protein kinase domain profile. 9 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00985 476 FunFam Maternal embryonic leucine zipper kinase 4 143 - -
Pte3g00985 476 Gene3D Transferase(Phosphotransferase) domain 1 3 332 - -
Pte3g00985 476 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 443 - -
Pte3g00985 476 CDD CIPK_C 339 454 - -
Pte3g00985 476 Gene3D Kinase associated domain 1, KA1 333 458 - -
Pte3g00985 476 Pfam Protein kinase domain 163 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00985 476 Pfam Protein kinase domain 9 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00985 476 ProSiteProfiles NAF domain profile. 333 357 IPR018451 GO:0007165
Pte3g00985 476 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Pte3g00985 476 FunFam Non-specific serine/threonine protein kinase 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00985 Pte-Chr3 8365316 8371129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00985 1 418 CBL-interacting serine-threonine protein kinases AT4G24400 77.033 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pte3g00985 Pkinase 4.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00985 - - gmx:100813117 794.267