Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00978 ATGCCTCACAGGGGGACTTACTTTTTTCCAAGGCAATTCCCAGACCGTGGATTCGATGAATCTTCGAAACAGCTATTAGATCACGAGAAAAAGAAAATCACCAACGCAGCAGCCATCAAATCCAGGGATATAGAAAGCGACCTCAAAAAGTCTCGTGTCACTTCAACTTCTCATTCAACCACTCCAACAGCACCAAAAGACGACGTCGTTTTCTCCAGTGGTGTCCCTAACAACAGCACCTTGCCTGTATCCGACGTTCTCACGAGTCATACAGGTGAAAAACACAAGTTCCACACCAAACACAAACAACTCGTCTTCTTTCACGACTGGTTGAAAGATAATAAAAAAGGTAGCATATCGACTCACGTGAAACGGTATGGCAATCGGTTATCGTGTGAGGAAGACCGTGAGCTGTTGCTCTCACCGGATCCCGCCCCTGAACCGTCACCGAATCCACCGCTGGCGGTGGTGTCCGACTCTTCGTCTCAGACTCAGGCTTTCAAGGATCGTAACATAGACCAGAGTTTCGATCGTCAGGTGTCGCTGCAGAGGTTTTCCAGTGGAAGTAGCTATGCTGGAAGTCTATTTTCTGGGACAACGTTGGATGGGAATATCTCAAGCGATATCAAGGAGGAAACATCGTCGTCTGTTGTTTCAGCCCTGCCTCCAACGAAGAGGAACGAGGATGAGGAGGGAAGCAGAGAGACTTTTACTCGGAAAACAACAGAAAGCTATTACTTGCAGCTTTCTTTAGCGAGGAGGCTTACTTATCAAGCAAGTATTGCCATTGAGCCTATACTTTCTGAAGTCTATGGAATTGATCATAATTTAGACGCGGAATCCGTCTCTTATCGTCTTTGGGTCAATGGTTGCTTGTCATACAGTGACAAAATATCGGATGGATTTTATAACATACTGGGGATGAATCCGTACCTGTGGGTTATGTGCAATGAAATGGAGGAAGGCAGGAGAATGCCAACATTGATGGCACTAAAAGCAGTTGAACACAATGAAACGACGATGGAGGTGATTCTTGTTGATGGACAGGAGGACTATCGCCTAAGGGAACTCGAAGATAAAGCCCAAGAGTTGTTCTTCGCATCGGAGAATACAATGGTGTTAGTCGAGAAACTAGGCCAGCTTGTTGCCATCTACATGGGGGGCACTTTCCCTTTGGAGCCAGGGGAACTCCATGCCCGATGGAAGGTTGTCAGTAAGCAGTTGAAGGATTTGCACAAGTGCATTGTAGTACCCATTGGCAGCCTATCCACAGGACTTTGTAGGCACCGTGCGGTTCTCTTCAAGAAACTTGCAGACTTCATAGGTTTACCATGTCGAATAGCGCGAGGTTGCAAATATTGTGTTGCAGATCATCGATCATCATGTCTTGTAAAGATCAAAGATGCCAGGCAGCTTTCAAGGGAGTATGTAGTTGATCTAGTTGGGAAACCAGGGAATGTCCACGGTCCAGATTCCACAGTCAATGAGGGATGTGTTTCTTCCGTGCCTTCACCTTTCCAAATTTCTCATCTTAGAGAATTCCAACAACCTTTCATGGACAATGGATCATGTCACCAAATGTTGAGCTCAAATGGTCTTTGTCTTTCCCCTGAAACTGTTCTTTATTCAGCTGAGCAGGCAGTCCCGAAGATGGAACCAGTAGTGATGCCATATGTTCTGAAAGGAAATGGGACTTCATTACGCAAACCCTTGAGGGTTTCTGGAGCCGATCTTGTCATCCAAGAGACTTCTGAAAGTAATATACCCAAGAATGCAGTTACTGAGATTTCCACGGATGGACTTTCTGAAGTTAAAGATCCACATAATCAATTTGTAAGCTATGAAAATCATCCTGCTAAGAATTTCCCAGTATACTTGGATATTGAACCATCTCTTGCAATGGACTGGCTTGAGATCTCATGGGATGAATTACAAATTAAGGAGCGCGTTGGTGCTGGTTCATTTGGGACAGTCCACCGTGCTGAATGGCATGGATCGGATGTGGCTGTCAAGGTTCTGACTGTTCAGGACTTTCTTGATGATCAATTGAAAGATTTCTTGAGAGAGGTTGCAATAATGAAACGCATTCGCCATCCAAACGTGGTTCTCTTCATGGGTGCAGTTACTAAGCGTCCACATCTCTCTATAGTGACTGAGTATCTGCCAAGGGGTAGTCTATATCGACTGATACACAGGCCAGCCTCTGGTGAAATTTTGGATCTAAGAAGGCGGTTACGCATGGCTTTGGATGTGGTTTGTGACTGTCGTTTCTACTTTTGTTTGCAAATTTGTAATAATTTTCTAGCTGGTGTCACAATTTTCCCTGTGATGCAGGCTAAAGGGGTGAACTATCTCCATCGATTGAACCCACCAATAGTGCACTGGGATCTTAAATCCCCAAATTTATTGGTTGACAAAAATTGGACTGTGAAAGTATGTGATTTTGGGTTGTCCAGATTCAAGGCAAACACTTTTATTCCATCAAAATCTGTTGCTGGAACACCTGAATGGATGGCTCCAGAATTTCTTCGTGGAGAACCTACAAATGAGAAGTCTGATGTTTATAGTTTTGGCGTCATTGTTTGGGAACTTGTTACCATGCAACAACCATGGACTGGCCTTGGCCCTGCGCAGGTGGTTGGAGCTGTAGCCTTCCAGAATAGAAGGCTTACAATCCCATCAGATACTTCTCCAGTCTTGGTTTCACTTATGGAATCTTGCTGGGACGATGACCCAGCTAAGCGCCCATCATTCGCAAGTATAGTTGAGACATTAAAGAAGCTGCTGAAGTCTTCAACGCAGTTGATACAGATGCGACAATCTGAAACGAACACCACGCGCTGA 2844 0.4494 MPHRGTYFFPRQFPDRGFDESSKQLLDHEKKKITNAAAIKSRDIESDLKKSRVTSTSHSTTPTAPKDDVVFSSGVPNNSTLPVSDVLTSHTGEKHKFHTKHKQLVFFHDWLKDNKKGSISTHVKRYGNRLSCEEDRELLLSPDPAPEPSPNPPLAVVSDSSSQTQAFKDRNIDQSFDRQVSLQRFSSGSSYAGSLFSGTTLDGNISSDIKEETSSSVVSALPPTKRNEDEEGSRETFTRKTTESYYLQLSLARRLTYQASIAIEPILSEVYGIDHNLDAESVSYRLWVNGCLSYSDKISDGFYNILGMNPYLWVMCNEMEEGRRMPTLMALKAVEHNETTMEVILVDGQEDYRLRELEDKAQELFFASENTMVLVEKLGQLVAIYMGGTFPLEPGELHARWKVVSKQLKDLHKCIVVPIGSLSTGLCRHRAVLFKKLADFIGLPCRIARGCKYCVADHRSSCLVKIKDARQLSREYVVDLVGKPGNVHGPDSTVNEGCVSSVPSPFQISHLREFQQPFMDNGSCHQMLSSNGLCLSPETVLYSAEQAVPKMEPVVMPYVLKGNGTSLRKPLRVSGADLVIQETSESNIPKNAVTEISTDGLSEVKDPHNQFVSYENHPAKNFPVYLDIEPSLAMDWLEISWDELQIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFLDDQLKDFLREVAIMKRIRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASGEILDLRRRLRMALDVVCDCRFYFCLQICNNFLAGVTIFPVMQAKGVNYLHRLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFIPSKSVAGTPEWMAPEFLRGEPTNEKSDVYSFGVIVWELVTMQQPWTGLGPAQVVGAVAFQNRRLTIPSDTSPVLVSLMESCWDDDPAKRPSFASIVETLKKLLKSSTQLIQMRQSETNTTR* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00978 947 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 211 933 - -
Pte3g00978 947 SUPERFAMILY Protein kinase-like (PK-like) 618 925 IPR011009 -
Pte3g00978 947 FunFam PAS domain-containing protein tyrosine kinase family protein 772 942 - -
Pte3g00978 947 MobiDBLite consensus disorder prediction 53 72 - -
Pte3g00978 947 PRINTS Tyrosine kinase catalytic domain signature 896 918 IPR001245 GO:0004672|GO:0006468
Pte3g00978 947 PRINTS Tyrosine kinase catalytic domain signature 786 804 IPR001245 GO:0004672|GO:0006468
Pte3g00978 947 PRINTS Tyrosine kinase catalytic domain signature 852 874 IPR001245 GO:0004672|GO:0006468
Pte3g00978 947 PRINTS Tyrosine kinase catalytic domain signature 718 731 IPR001245 GO:0004672|GO:0006468
Pte3g00978 947 MobiDBLite consensus disorder prediction 212 237 - -
Pte3g00978 947 FunFam Serine/threonine-protein kinase isoform 1 634 722 - -
Pte3g00978 947 ProSiteProfiles Protein kinase domain profile. 644 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00978 947 Pfam Ethylene-responsive protein kinase Le-CTR1 279 487 - -
Pte3g00978 947 MobiDBLite consensus disorder prediction 139 164 - -
Pte3g00978 947 Gene3D Transferase(Phosphotransferase) domain 1 723 939 - -
Pte3g00978 947 ProSitePatterns Protein kinases ATP-binding region signature. 650 671 IPR017441 GO:0005524
Pte3g00978 947 SMART serkin_6 644 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00978 947 Gene3D Phosphorylase Kinase; domain 1 637 721 - -
Pte3g00978 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Pte3g00978 947 CDD STKc_MAP3K-like 650 925 - -
Pte3g00978 947 Pfam Protein tyrosine and serine/threonine kinase 644 925 IPR001245 GO:0004672|GO:0006468
Pte3g00978 947 MobiDBLite consensus disorder prediction 45 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00978 Pte-Chr3 8263272 8270255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00978 1 938 MAP Kinase Kinase Kinase AT4G24480 54.545 0.0 1009
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pte3g00978 PK_Tyr_Ser-Thr 4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00978 - - qsa:O6P43_015405 1141.72