Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00976 ATGGGAAGCATCATGGAAAGGACGGACGAGATGGAACCGAGCTCCCCTGGGTTAGGGGTCGATCCTACTGTTATGTCCATGCAAGGGAAAAGACAATTGGTATTAGGAATTGCTCGACAACCAAATGATACCACAACAGGTTTACTTCGGTCCTATAGTCGCAAACAGCTTCTAGAAATCATTATTGCTGAGATGGGTGAGGATAGTAAATACAAAGGATATACTAAAACCAGAATGATTAAGCAACTAATAAAGCTAGTCTCCCAGAAATCTGAGTCAAGTAAACTTGGGCGTACTGTTAACCCCAAAAATCATGTTGGATGTAAAAGGCAAAAGAATATGAGTCCTTCATTTCGAGACCTAAATAGTATTCCTCTGGAAAACAATGAAGCAGAGGAAGTGAAGACCTTACTGTGTAAAAATGCCTCTTGCAGAGCTTTTCTAAGTCCCAAAGATGCTTTCTGCAAGAGATGTTCCTGCTGCATTTGTCACAAATATGATGAAAACAAGGATCCTACTTTGTGGTTGACCTGTGCTTCTGATATAGCTGATGGGAAGGAATCATGTGGAACGTCATGCCATTTGGAATGTGCTATTAAAGATGAAAGGACTGGCATTAAGAATAGCAGATGTTGTGCAAAGTTGGACGGAAGCTTCTATTGTCTTTCATGTGGACAAGTTAATGGATTGATGAGAACATGGGCAAGACAACTGGCGGTTGCCAAAGAAGCAAGAACAGTGGACACATTGTGTCTACGGTTATCTTTAGCCTACAGGGTTCTCATAGGAACAGATGCGTACAGAGAGTTACATAAGACTGTTGAAGCTGCAGTCAACTTTCTCGAAGATGAAGTCGGGCCTCTGGATCATGTATCTGCAATGACAGCATGCAGCAGTGTGAACAGTCTTTCATGTGGTGCTGAGGTCCAGAAGCTATGTGCATCTTCTGTTGAATATTTCCAGACAACGTTTCCTGATATTTATTTAGAGAAAAAAGAGGCACCAACTTGTTCAATACATTTTGAAGATTGTTCACCTTCCGCAGTAGTCATTGTTCTACAATACGATGATCATCTGCTAGAGAATGTTGTAGGTTGGAGGCTCTGGCATCGTATGTCATCAGCAGACTATCCTGAAGAACCGACCTTCAATATACTGAGTCCACAGAAGAGATTCCAGTTAGACAATCTTTGTCCTTCTACTGAGTACTTCTGCAAGGTTTCCCTATTTAGCAACTCTAAAATTTTGAGTGTTTCAGAGGCAAAATGCGCTACACCATCTCTTTCAAACTCAGCTGTTGTGGTCATGAATGATAACATAACCCCATATTCATCAAATGGCAGCTCAGTTATAGATTTAGATAGCAATGCAATGGAAGACGGACAGGATGAAGATTACAGTCTAAGAGAACATCCAAAACAGATCAGGTTAGAAAAGCCTTCTAGAGAAGCAAATAGATGTATGAAAGGTGGAGCAGTTTCTCTTCCCACCCCTAGTAAAACCAATGGAAAGAGACAAGTTGATGGCTTTGGTTGTAAAAGGCAATCCGAGGAAAGTTGTTTTGACTACTCTGTGAGAGTAGTGAAATGGTTAGAAAATGAAGGCCTCCTAGACAAAAAATTTAGAGTGCAGTTTCTTGGATGGTTTAGCCTTAAAGCCACCACGAAGCAAAGGTATGTGGTGAATGTGTTCGTGGATGTCTTGCTTGATGACCCACAGAGCTTGGCAGAGCAACTTGTGGACACCTTTATGGACGAGATATGTTTTGAGCCAGTGGGTCAGCGAGGTTTCAATCGAAGTGGGCCAAGACTTCAATGA 1818 0.4169 MGSIMERTDEMEPSSPGLGVDPTVMSMQGKRQLVLGIARQPNDTTTGLLRSYSRKQLLEIIIAEMGEDSKYKGYTKTRMIKQLIKLVSQKSESSKLGRTVNPKNHVGCKRQKNMSPSFRDLNSIPLENNEAEEVKTLLCKNASCRAFLSPKDAFCKRCSCCICHKYDENKDPTLWLTCASDIADGKESCGTSCHLECAIKDERTGIKNSRCCAKLDGSFYCLSCGQVNGLMRTWARQLAVAKEARTVDTLCLRLSLAYRVLIGTDAYRELHKTVEAAVNFLEDEVGPLDHVSAMTACSSVNSLSCGAEVQKLCASSVEYFQTTFPDIYLEKKEAPTCSIHFEDCSPSAVVIVLQYDDHLLENVVGWRLWHRMSSADYPEEPTFNILSPQKRFQLDNLCPSTEYFCKVSLFSNSKILSVSEAKCATPSLSNSAVVVMNDNITPYSSNGSSVIDLDSNAMEDGQDEDYSLREHPKQIRLEKPSREANRCMKGGAVSLPTPSKTNGKRQVDGFGCKRQSEESCFDYSVRVVKWLENEGLLDKKFRVQFLGWFSLKATTKQRYVVNVFVDVLLDDPQSLAEQLVDTFMDEICFEPVGQRGFNRSGPRLQ* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00976 605 MobiDBLite consensus disorder prediction 1 21 - -
Pte3g00976 605 Pfam PHD - plant homeodomain finger protein 139 258 IPR032881 -
Pte3g00976 605 CDD PHD_VIN3_plant 159 224 - -
Pte3g00976 605 PANTHER VIN3-LIKE PROTEIN 2-RELATED 23 436 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00976 Pte-Chr3 8239265 8243286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00976 22 587 PHD Gene Family AT5G57380 31.863 1.24e-85 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00976 - - vvi:100266086 569.696