Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00975 ATGTTGAAAATCAGAGATCTTTCTCCCATTTTGTCCCATTTTCTCAAAATTTGGGTAGTCTTACGACATAAGTTTCCATCAATGGTTGAGAAAACGAAGAAAAACAAGAAGGTTTATTTTAACAACGACGCCGCTTATTCTCTCCTACAAAGGTATGAACTTAGGACGATACTGACATTGCTTCAAGAGGTGGAACATCATGCGGATGTGAAGATTGATTGGAGTGAATTAGTGAAGAATACTTCAACTGGGATTACTAATGTTAGAGAGTATCAGATGCTATGGAGGCATTTGGCCTATCGGGATAGCTTACTTGACAATTTCGAAGACGGAGCTCAACCTCTGGATGGTGACAGCGACTTGGATTGTGAACTGGAAGCATGTCCTGCACCTACCAATGAATCATCTATAGAGGCTGAAGCATGTGTAAAGGTAATGGTGGGTTCTAAGGTACAGAGTGAATCTAACCTCCCTAGTGTCTCAACAATTGAGGCTCCACTAACTATAAGTATTCCCACTGGTCACTCAGCTAGGAGTCCTTCAGAAGGTCTGCAGACGTCATGTGCAATGCAGTGCAAAGCCGTTATTGTTCCAGTTACTGTTCAGAAAGTTCCCCTGCCTTCTGCACCGTCTGTTGAAAATGTGGAAGCAAATAGATCAAATGACAATTCATTAAAGCGGAAACGAAAATGGTCAGAGGAAGAAGATAAACAGCTCATTACTGCTGTCAAAAAGTGGGGTGAGAGGAATTGGGCTGTTATCATTAAGAAAGGAGAATATGACTGGGGCGGCAGACAGGCTCCGCATCTATCTCAGAGGTGGGCAACTTTACGGAAGAAAAACAACTCAAGCACAGGCAACAAGTCGACAAGCCCACAACTTATTGAGGCACAGATAGCAGCTCGTCAAGCAGTTTCACTGGCTCTTGGTTTGCCAGTCAGAAGCCTACCAGCAAATGGAATGGCTGGTCCTGAGTCAACTAAGGCTGTGCAGTCCAATACTGCTGTCAAAGCTTCTGCAGCTGGAAACCAACCTGAACAATATCTGTCCAGACAGAGTTTTAATGATTCAAAGCTATCTCCTAGCATGGCTCTTGCTACTTCCATAAAATCTCAATCAATCTCAAAAAAGACGTTGCCAAAGTCCAATCTGGGTCCAGAGTCTGCCGCACGAGATACTGCAGTTACCGCTGGTGCTCTTATTGCCTCACCACTAGATACTGCATCAATGATAAAGGCTGACCAGGCAAAGAATGAGGTGTATATTATAGGTTCTAGTGGATCTACAGTCAAATCGCCATTGCCTGCTGGTGGAGCCGATCAAGGAGAAGTTCACCCAATCTTGTGA 1347 0.4402 MLKIRDLSPILSHFLKIWVVLRHKFPSMVEKTKKNKKVYFNNDAAYSLLQRYELRTILTLLQEVEHHADVKIDWSELVKNTSTGITNVREYQMLWRHLAYRDSLLDNFEDGAQPLDGDSDLDCELEACPAPTNESSIEAEACVKVMVGSKVQSESNLPSVSTIEAPLTISIPTGHSARSPSEGLQTSCAMQCKAVIVPVTVQKVPLPSAPSVENVEANRSNDNSLKRKRKWSEEEDKQLITAVKKWGERNWAVIIKKGEYDWGGRQAPHLSQRWATLRKKNNSSTGNKSTSPQLIEAQIAARQAVSLALGLPVRSLPANGMAGPESTKAVQSNTAVKASAAGNQPEQYLSRQSFNDSKLSPSMALATSIKSQSISKKTLPKSNLGPESAARDTAVTAGALIASPLDTASMIKADQAKNEVYIIGSSGSTVKSPLPAGGADQGEVHPIL* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00975 448 MobiDBLite consensus disorder prediction 325 355 - -
Pte3g00975 448 CDD SANT_TRF 229 279 - -
Pte3g00975 448 SUPERFAMILY Homeodomain-like 226 280 IPR009057 -
Pte3g00975 448 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 28 439 - -
Pte3g00975 448 MobiDBLite consensus disorder prediction 212 233 - -
Pte3g00975 448 MobiDBLite consensus disorder prediction 316 355 - -
Pte3g00975 448 ProSiteProfiles Myb-like domain profile. 223 278 IPR001005 -
Pte3g00975 448 Gene3D - 220 286 - -
Pte3g00975 448 MobiDBLite consensus disorder prediction 370 390 - -
Pte3g00975 448 Pfam Myb-like DNA-binding domain 228 274 IPR001005 -
Pte3g00975 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 223 282 IPR017930 -
Pte3g00975 448 SMART sant 227 280 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00975 Pte-Chr3 8232836 8236962 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte3g00975 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00975 - - qsa:O6P43_015394 389.037