Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00972 ATGTCCTGCCCTGGGTCTACCGGAATTTCCTGTGATTTTAGGGTCTATAATTGTCATGGATGCAATGTCAGACGTTACAATGTGACCGGAGGCAGTCGTTTGCGTATGGTTGGCAGAGATCATTATTTACATGGTTTGAGTCTGGACTTATTAACTCTCAATCAACCGAGTAGGGAGAGTGTCCCAATAAGCAAATTACCATCCAGGAGTAAGGTTTTGGTATGCCGATCAGTTCTTGTACCCGGGGGAGGAAGTTTAGCTCCTCTTGTGAAGTCGGCCACTGTTGCTTTTTCCAGGTTTTGTAATAATCTGCAAAAAAGTCCCGTTGTACTCCAACTAATTCCAGCTGTCAGTGTCATAGCTTTTGCTGCATGGGGTCTTGCTCCAGTCCTGCGTATGGGCAGGATTTTGTTTCTACATAGGACTGATAGCAGTTGGAATAAAAGTAGGTCACATTATGTGATGACGTCTTATCTGCAGCCTTTGCTACTGTGGACTGGAGCAATATTCATCTGCAGGGCTTTAGACCCAGTAGTCTTACCTTCAGAAGCCAGTCAGGTAGTGAAGCAACGATTGCTGAATTTTGTTCGATCACTATCCACAGTTCTGGCATTTGCCTATTGTCTATCAGGCCTGATTCAACAAGTCCAAAAATTCCTTAAGGAGACAAATGAATCAAGTGACGGAAGGAATATGGGTTTTGATTTTGCTGGAAAAGCCATTTATTCTGCAGTATGGGTTGCTGCAGTCTCATTGTTCATGGAGTTGCTGGGTTTCTCCACCCAGAAGTGGCTGACTGCTGGTGGTCTTGGCACAGTCTTGCTCACTCTTGCAGGTCGTGAGATATTTACAAACTTTCTTTCAAGTGTAATGATCCATGCAACCCGTCCATTTGTTGTGAATGAGTGGATTCAGACTAAGATTGAAGGATATGAAGTTTCTGGTACAGTTGAGCATGTAGGTTGGTGGTCACCTACAATTATCAGAGGTGATGATCGGGAAGCAGTTCACATTCCAAATCACAAGTTTACTGTAAATGTTGTGAGGAATCTTACTCAGAAATCTCATTGGCGTGTCAAGACTCACATAGCCATTAGTCACTTAGATGTAAATAAGATCAATAGTATTATAGCTGACATGCGCAAGTTATTGGCCAAAAACCCTCAAGTAGAGCAGCAAAGGTTGCATAGAAGGGTTTTTCTGGAAAATATCAATTCCGATAATCAGGCTCTTATGATATTGATATCTTGCTTCGTGAAAACTTCACATTTTGAAGAGTATCTCTGTGTCAAGGAAGCAATTCTCTTGGATCTTCTGAGAGTTGTCAGCCATCATAAGGCCCGGCTTGCCACACCCATTCGCACTATCCAGGAAGTATATGGTGAAGCTGCATTGGAAAGTGTACCATTTAGCGATACCATATTTACTCGTGACAGAGGAGCAACAAACCGTCCACTCCTATTGGTGGAACCTGCTTATACAATCAATGGAGAAGAAGAAGTTAAGGCTTCAACTCTTTCAGAACCGAAAAATGGAGAGAAAGATGCCAAGCTAAATGAAGCCTTGACATCTGAATCTAAATTTGAAACAAAAGCTGTGTCAGGGCGAGTTGCTGATCCCAACAAGGATGACAAGGTTGCAGGGACAAAGGCATCCACACTTAGTTCAAGCTCCACTGCCAAGTTGAAGTCAAGTTTTGGAATCCAGGCGCAGGACACGGGTCCTGATAATTCAATCTCTAGATCTGTGCATCTTAAAAACGATGGCAACGGAGTTGCAGAAAGTGTAGGAGCTACAGAAACAGAAGGCAGACAAAAGGTGCAAGAGAATTCTCCTGTAGTTTCCCTTGAGCGTGGCAAGGGAGAAATTCCTTCTGCCAGTCCACAGGCTAAACAAGATGACGACAAGTCACCGCCACCATTGACATCGCCATCTCTATCCAGGCCTTCTTTGGAGGACAATCTTGTTCTAGGTGTGGCTTTAGATGGCTCGAAACGAACTCTTCCAATTGATGAAGAAATCAACCAATCTCCTATTCGCGCTGAGTCAAGAGAATTTGCCAGCCAGCAAAATGGAAGTGGGCTTCCTTCTGGCAATGACAATAACAATGGTCATACGCCAAATCCTTCAATAAAGAAGAATGATTAA 2148 0.4344 MSCPGSTGISCDFRVYNCHGCNVRRYNVTGGSRLRMVGRDHYLHGLSLDLLTLNQPSRESVPISKLPSRSKVLVCRSVLVPGGGSLAPLVKSATVAFSRFCNNLQKSPVVLQLIPAVSVIAFAAWGLAPVLRMGRILFLHRTDSSWNKSRSHYVMTSYLQPLLLWTGAIFICRALDPVVLPSEASQVVKQRLLNFVRSLSTVLAFAYCLSGLIQQVQKFLKETNESSDGRNMGFDFAGKAIYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLTQKSHWRVKTHIAISHLDVNKINSIIADMRKLLAKNPQVEQQRLHRRVFLENINSDNQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHKARLATPIRTIQEVYGEAALESVPFSDTIFTRDRGATNRPLLLVEPAYTINGEEEVKASTLSEPKNGEKDAKLNEALTSESKFETKAVSGRVADPNKDDKVAGTKASTLSSSSTAKLKSSFGIQAQDTGPDNSISRSVHLKNDGNGVAESVGATETEGRQKVQENSPVVSLERGKGEIPSASPQAKQDDDKSPPPLTSPSLSRPSLEDNLVLGVALDGSKRTLPIDEEINQSPIRAESREFASQQNGSGLPSGNDNNNGHTPNPSIKKND* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00972 715 MobiDBLite consensus disorder prediction 548 585 - -
Pte3g00972 715 MobiDBLite consensus disorder prediction 630 650 - -
Pte3g00972 715 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 49 690 IPR045042 -
Pte3g00972 715 Pfam Mechanosensitive ion channel 239 447 IPR006685 GO:0016020|GO:0055085
Pte3g00972 715 MobiDBLite consensus disorder prediction 528 715 - -
Pte3g00972 715 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Pte3g00972 715 Gene3D - 298 353 IPR023408 -
Pte3g00972 715 Gene3D - 191 296 - -
Pte3g00972 715 MobiDBLite consensus disorder prediction 681 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00972 Pte-Chr3 8217433 8223582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00972 44 694 Mechanosensitive Ion Channel Family AT5G10490 57.056 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00972 K22047 - qsa:O6P43_019565 877.085