Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00947 ATGAGTAGAGCTAAACCCCTTCACTTGATTCCTGTTCTCTTCTTCCTTTCATGTCACTTCTTTCTTCACTATTCACAAGCACAGCTACCACCCAACATCACAGGTGTTTCCTGCACTGTCAATCAGACCAGCAATCCATGCCAAACCTATGTTTTCTACAGAGCTGTGCCTCCAAATTTCCTTGACCTTGCATCAATAGGTGACCTCTTCTCTGTCAGCAGAGTCATGATATCAGAACCCAGTAACATATCTTCCCCATCCGCTCCTCTCATCCCTAATCAACCACTCTTTGTTCCAATCACTTGTTCTTGTAGCAGGGTCAACAACACAAACATCTCTTTTGCTAACATTTCTTTCACAATCAAGGCAGGTGACACTTTCTATGTTGTCTCAACTTCAGAATTTGGGAATCTTACTACATTCCAATCTGTTGAGCAAGTCAATCCAACTCTTGTCCCTACGAATCTTACAATTGGTGCTAAGGTTATTTTCCCAATCTTCTGCAAGTGTCCTTCAAAAGCACAAACACAAAACCAAATAAACTATTTGGTCTCCTATGTGTTTCAACCTTCTGATAGGTTGTCATCAGTGGCTTCAAGGTTTGCAGTGACACCACAGTCCATAACCGGCGTGAATGGCAACAATATTCAGCCATATGATACAATATTTATTCCGGTCACTCAGCTGCCACGACTAGCGCAGCCGACGGTGGTTACTTCCTCACCACCTTCTACTGGATCATCTGACAGAAAAGGAACTGTCACAGGTTTGGCAATTGGGTTGGGGGTGACTGGTTTTCTGTTGATTCTTGTTACTGGGATGTTGATTTATAAGTTGGTTTCTCGCGAGGAAAGTACGACTGTAGTGAAAGATGAGGAGAAACAGAAGCAGCAAGTTTATGGAGGAGGGAAAGAGCAGAAAGGTTCAAAGGAAAAAGATCTAGACTTGTTAGCTAATGTGTCTGATTATTTAGACAAGTATAGAGTTTTTGAAATAATTGAGCTTTTGGAAGCAACTGATGGTTTTCATGAGAGTCACTTGATTCAAGGTTCTGTGTACGAAGGGTCCATCGATGGAGAAGTGTTTGCAATCAAGAAGATGAAATGGAATGCCTATGAAGAACTCAAGATCTTACAGAAGGTAAACCATGGGAACCTGGTGAAACTAGAAGGCTTTTGCATAGACCAAGAAGGAGGAAGCTGCTATTTAGTCTATGAATACGTTGAAAATGGATCTTTATATTCATGGTTACACGATAAGACGAGGAATGAAAAGCTAAGCTGGAAAGCTAGGTTGAAAATCGCCATTGACGTTGCAAATGGTCTGCAATACATTCACGAGCATACAAGGCCGAGGGTTGTGCACAAAGACATCAAAAGCAGCCATGTTCTTCTAGACTCAAACATGAGAGCCAAGATTTCCAATTTTGGATTGGCAAAATCAGGATGCAATGCAATTACAATGCACATAGTTGGTACTCAAGGTTATATTGCTCCAGAGTATTTGGCTGACGGTGTGGTCTCTACGAAAATGGATGTGTTTGCATTTGGGGTAGTGTTGCTTGAACTTATATCAGGTCAGGAAGCCATTGATGAGGCAGGTAATGTTTTATGGGCTAGAGCTGTTAGAAGTTATGAAGTTAACGAGAAAGAGAAGGTGATTAGAGTAAGAGAATGGTTGGATGAGTCTTTGGTAAGGGAGTCATACTCCATGGAAAGTGTATTGAATGTTATGAACGTTGCTGTTGCTTGTTTGCACAAGGACCCTGCCAAGAGACCAAGCATGGTGGATATTGTTTATGCATTGTGTAGGAGTGACGATGCAGGCTTTGACATCTCAGATGATGGGTCAGGGACCCCGTTGGTGATGGCAAGATGA 1878 0.4207 MSRAKPLHLIPVLFFLSCHFFLHYSQAQLPPNITGVSCTVNQTSNPCQTYVFYRAVPPNFLDLASIGDLFSVSRVMISEPSNISSPSAPLIPNQPLFVPITCSCSRVNNTNISFANISFTIKAGDTFYVVSTSEFGNLTTFQSVEQVNPTLVPTNLTIGAKVIFPIFCKCPSKAQTQNQINYLVSYVFQPSDRLSSVASRFAVTPQSITGVNGNNIQPYDTIFIPVTQLPRLAQPTVVTSSPPSTGSSDRKGTVTGLAIGLGVTGFLLILVTGMLIYKLVSREESTTVVKDEEKQKQQVYGGGKEQKGSKEKDLDLLANVSDYLDKYRVFEIIELLEATDGFHESHLIQGSVYEGSIDGEVFAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDQEGGSCYLVYEYVENGSLYSWLHDKTRNEKLSWKARLKIAIDVANGLQYIHEHTRPRVVHKDIKSSHVLLDSNMRAKISNFGLAKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFAFGVVLLELISGQEAIDEAGNVLWARAVRSYEVNEKEKVIRVREWLDESLVRESYSMESVLNVMNVAVACLHKDPAKRPSMVDIVYALCRSDDAGFDISDDGSGTPLVMAR* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00947 625 Gene3D Phosphorylase Kinase; domain 1 312 407 - -
Pte3g00947 625 SUPERFAMILY Protein kinase-like (PK-like) 325 602 IPR011009 -
Pte3g00947 625 Gene3D Transferase(Phosphotransferase) domain 1 408 613 - -
Pte3g00947 625 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 604 - -
Pte3g00947 625 ProSiteProfiles Protein kinase domain profile. 294 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00947 625 FunFam PTI1-like tyrosine-protein kinase 3 408 608 - -
Pte3g00947 625 Pfam Protein kinase domain 363 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00947 625 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Pte3g00947 625 SMART LysM_2 185 225 IPR018392 -
Pte3g00947 625 SMART LysM_2 118 165 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00947 Pte-Chr3 7960000 7964170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00947 32 604 Receptor kinase-like Gene Family AT2G23770 34.118 1.56e-86 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte3g00947 Pkinase 4.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00947 - - qsa:O6P43_003293 889.797