Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00937 ATGGAGCAACTTACAAGAAGTTGTACCATTCTTCACGTCGAAACTTTCAATTCTAACAAGAAAAGGAGTGGGGTATTGATGAGGAGGAAAGCAGACTACACAATCAATGTACACTGGAAGGGTGCAGCAGAAATGATCCTTGCTTTGTGTTCGAGATACTATGATGCTTCTGGGATGCCGAAAGATTTGGATGATGATAAAGAGCGTGAGGATGGAATTGAAAGTAAGCATGTGCAAGAAGATGGATTAACGTTGTTGGGGCTGGTAGGCATCAATGATCCATGTCGTCCAGGGGTGAAGAGTGCTGTGGAGAATTGTCAATATGCTGGTGTGAATGTCAAAATGATCACGGGCGACAATGTCTTCACGGCAAAAGCCATAGCCACTGAATGCGGCATACTCAAGCATGGTCAAGATACCAGTGGGGCAGTGGTGGAAGGTGAGGAGTTCCATAACTACACCCCAGAAGAGAGAATGAAGAAAGTAGACAAAATCTGTGTAATGGCAAGATCCTCTGCATTCGACAAACTCTTAATGGTGCAGTGCTTAAAACAGAAGGGACATGTTGTTGCAGTCACTGGTGATGGCACTAACGATGCACCGGCATTGAAGGAAGCTGACATAGGTCTTTCTATGGGCATTCAGGGAACTGAAGTAGCCAAAGAGAGTTCAGATATTGTCATTTTGGATGACAATTTTGCGTCCGTAGCCACAGTGTTGAGGTGGGGGAGGTGCGTTTATAACAATATCCAGAAGTTCATTCAGTTTCAGTTGACTGTGAATGTTGCTGCACTTGCAATCAACTTCATCGCTGCAGTTTCAGCAGGTGAAGTTCCATTAACAGTAGTTCAACTATCGTGGGTAAATTTGATTATGGATACACTTGGTGCTCTAGCTCTTGCAACAGAGAAACCAACCAAGGAGCTCATGGAGAAACCACCGGTGAAGGATACTTTGATATTCAATACTTTTGTGCTTTGCCAAGTTTTCAATGAATTCAACGCAAGGAAGCTTGAGAAGAATAATGTTTTTGAGGGTGTACACAGGAACAAGTTGTTTCTGGGGATCATAGCAATTACTATAGCCCTTCAGGTGGTAATGGTTGAGTTTTTGAAGAAGTTTGCAAATACTGAGATTAAATTGGGTGCAGTGGGGTGCCTGCATTGCACTTGCAGCCATGTCTTGGACAATCGGTTGGGTTGTCAAGTGCATACCTGTTCCAAACAAACCATTGCTCAACTTTCTGCCAAGACATCAGCAGTTTATTCAAGCACACAGAATGATACCTTGGTGCCAGATTTGGACAGGAAATCTTGA 1317 0.4351 MEQLTRSCTILHVETFNSNKKRSGVLMRRKADYTINVHWKGAAEMILALCSRYYDASGMPKDLDDDKEREDGIESKHVQEDGLTLLGLVGINDPCRPGVKSAVENCQYAGVNVKMITGDNVFTAKAIATECGILKHGQDTSGAVVEGEEFHNYTPEERMKKVDKICVMARSSAFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLRWGRCVYNNIQKFIQFQLTVNVAALAINFIAAVSAGEVPLTVVQLSWVNLIMDTLGALALATEKPTKELMEKPPVKDTLIFNTFVLCQVFNEFNARKLEKNNVFEGVHRNKLFLGIIAITIALQVVMVEFLKKFANTEIKLGAVGCLHCTCSHVLDNRLGCQVHTCSKQTIAQLSAKTSAVYSSTQNDTLVPDLDRKS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00937 438 Gene3D - 317 391 - -
Pte3g00937 438 FunFam Calcium-transporting ATPase 88 238 - -
Pte3g00937 438 Gene3D - 63 94 IPR023299 GO:0000166
Pte3g00937 438 PRINTS P-type cation-transporting ATPase superfamily signature 217 229 - -
Pte3g00937 438 PRINTS P-type cation-transporting ATPase superfamily signature 193 212 - -
Pte3g00937 438 PRINTS P-type cation-transporting ATPase superfamily signature 87 98 - -
Pte3g00937 438 PRINTS P-type cation-transporting ATPase superfamily signature 109 119 - -
Pte3g00937 438 PANTHER CATION TRANSPORTING ATPASE 316 389 - -
Pte3g00937 438 PRINTS H+-transporting ATPase (proton pump) signature 225 250 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g00937 438 PRINTS H+-transporting ATPase (proton pump) signature 193 209 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g00937 438 SUPERFAMILY HAD-like 42 298 IPR036412 -
Pte3g00937 438 NCBIfam HAD-IC family P-type ATPase 7 134 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g00937 438 NCBIfam HAD-IC family P-type ATPase 166 273 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g00937 438 Pfam Cation transport ATPase (P-type) 2 52 - -
Pte3g00937 438 Gene3D - 95 238 IPR023214 -
Pte3g00937 438 Pfam haloacid dehalogenase-like hydrolase 65 207 - -
Pte3g00937 438 Gene3D - 239 316 - -
Pte3g00937 438 Pfam Cation transporting ATPase, C-terminus 278 317 IPR006068 -
Pte3g00937 438 Pfam Cation transporting ATPase, C-terminus 317 378 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00937 Pte-Chr3 7864289 7871135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00937 1 377 Primary Pumps ATPases AT3G63380 65.158 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00937 K01537 - qsa:O6P43_021514 616.305