Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00936 ATGCAGCTAGCTAATCAGTCCGAAGAAACGGTCCCTGAAGCTCCTGAGTTTCAGAAGAAAATCGAAGAGGAGCAATCCTTAACTCGTACGGAGAATTGTGGGAACACGTACGATGATTTGGTTGTTGACGTTTCTGGGAGAAGTTTTGAATTTCCGGTGTTGGAGAACGCATCGGAGCATACAACTGCTGGTAGTTTGTATTTGTACAAGAATGCATATAGTTTGATACCCAAGTCATCGGTTAAGCTTTGCAGCTTGAAGACTCTGAAATTTTTTGGGAATGAGGTTAATTTATTCCCATCCGAGTTAAGGAGCTTTACCGGGTTGGAATGCTTGCAAATGAAGATTTCGTCACCAGGTTTTGGTGGATTACCTTTGCATAAGTTGAAAGGTTTGAAGGAACTTGAGCTTTCTGAAGTACCACGTCGCCCTTCTGCTTTTCAAATATTGAGTGACATCGCTGGTCTCAAGTGCTTGACTAAGCTCTCTGTTTGTCACTTTGGTATACGATATCTCCCACCAGAGATTGGCTGTTTAAGGAATCTGGAGTATCTTGATCTTTCATTCAATAAGATAAAGACTTTGCCATGTGAAATTGGTTGTTTGACTGCCTTGATGCTGTTGAAAGTAGCTTATAACAAATTGGTTGAAGTACCTTCGGCATTGCGCTATCTTACACGGCTTGAGTGCTTGGACCTGTCAAATAATAGGTTGACATCGTTGGCATCCCTTGATCTTGGCATGATGCATAAACTTCAAAATCTGAATCTTCAGTATAATAAACTTCTAAGCGCATTAGAAATACCTTCTTGGATAAACTGTACCATGGAAGGTAATGGCGTACACCTTCATCCCGATGATTTCAGCAGTACTTCTGTTGAGATGGAAGTATATGAAGGCAACTGGCAGGAGGATGATAGAAGTCCTTCTCATAAAGGCCCTCAATGTTTGTCATCTAACTTATTGACAAGTAACTCATCTAATAGTAGATGTTTTGGAGCCCGAAGATCAGGTAGGCGTTGGAAGCGACGGACTTATTTGCAGCAAAAAGCTCGCCAAGAAAGGTTAAACAACAGCAGGAAATGGAAAGGGATGGATCATACTGAATTGTCGACTGCAAAGAGTGGTGTGATTTGCAAGCTAGGTGATGATGCTCTAACTCCCGAACCTTGTTCTCAAGCTGCTACAGATATAGTCGATAAAGATGCAGATGACAGAAATATACTGACCGGACAATCAAAAGACAATAAATTGTGTGATGATGTTGCTGGTGATAGGCTTCTTCAGAATGGTACTTCGATTGAAGCTGAAGTTTGCTCTTGTACTAGCCTTGAAACTACTGTTCCAAGTAAATATGAACTGCAGGCAATAGTAGCTTCGCCAGATAGTAGTGAGGTTGAGCATGTTGAAGGTTCTTGGGATGTTTTAAAATTCTCTTCTAAGACAAAGAGAAACTATGAGCAGGATCTTGATAATCCTAAACCTTGCAAGTTCAGAAGACCTGTTGATGAAAGCTCTGTCCTATCCTGTAAGTATAGCAAGGTCTCATTTTGTGGAATTGAGGACCACATTCCAGATGGTTTTTATGATGCTGGACGTGATAGACCTTTTATGCCTCTTGAGAATTATGAGCAAAATCAGTGCCTTAGTGCACGTGAAGTGATCCTATTAGACAGGAAGAGGGATGAAGAGCTGGATGCCATCACACTCTCTGCTCAAGCATTGGTGAAGCACATGAATGAATTAACGAGATGTTGTGATCATGCTGCTGTGTGCGACTTGCAAATTGCCACATTTCTTGCTTTCTTTGTATCTGATCATTTTGGAGGCAGTGACCGAAGTGGTGTTATTGAAAAGACTCGTAAATCTGTTTCTGGTTCAAACTATCAGAAGCCGTTCATCTGTACATGCTCGACTGGAAGTAGTGATGGCAATGTCTTCTTTCCTAAAGAAATTGTCAAATCTGTAGATGACATTTTTTCTGATATATGTGAAAAGTCTCTTCATTCTATAAAAAATCGGCAGAACTCTATCATTGTCCCAATTGGAGCACTTCAATATGGGATCTGTAGACATCGAGCACTTCTCATGAAGTATTTATGCGATCGAATGGAGCCACCTATACCTTGCGAGCTTGTTAGAGGTTACCTGGATTTTATGCCTCATGCCTGGAATGTTGTTCTCATTCAGAAGGCTAACAAGTTGGTTCGCATGATAGTTGACGCTTGTCGCCCTCATGACATTAGAGAAGAGACAGACCCAGAATATTTTTGCAGATATATTCCTCTCAGTCGTTCCAAAGTTCCTCTTGCAACAAGCAGCGATGCTGTCCCTGGTTGTTCCTTTCTACCGGCATCCAGCAGTGAGGAAATTGAGAAAGCACCTTCCAGTACATTAGTCCGGTCTAGATTGGGATCACTTGAGGTGGCAGCAAAGGTGCGAACGCTGAAAGTGGATGGCAGTTCAGCTAATGAGATAAGAAACTTTGAATATAACTGCCTGGGAGAAGTTAGAATTTTATCCGCTTTGAGACACTCATGTATAGTTGAATTGTACGGGCATCATCTATCTTGCAAGTGGACCCCTTTGGTGGATGAACACCAAGGATGTCGTACATTACAATCTGCAATAGTGATGGAGTATGTGAAAGGTGGATCTTTGAAGAATTACCTAGAGAAGCTACTAAAAGAAGGTGAGAAGCATGCTCCATGGGACCTTGCAATGAGTGTTGCCAGGGATGTTTCATGTGCCCTGGCAGAGCTGCATTCTAAACACATCATTCATCGTGATATAAAAAGTGAAAACATTCTCATTGATTTGGAGAATAGAAGAGATGATGGAGCTCCCATCGTCAAGCTTTGCGATTTTGATAGAGCAGTGCCACTTAGGTCAATGTTGCATACATGCTGCATTGCTCACAAGGGAGTACCTCCTGCTGATGTGTGTGTCGGGACTCCTCGATGGATGGCTCCAGAAGTAATGCGAGCAATGTATAAACCAAATGCTTATGGAGTGGAGGTGGACATTTGGTCATATGGGTGTTTAATTCTTGAGCTACTGACATTAAAAGTTCCTTATTCTGGATTATCTGAGAGTCAAATCCATGATCATCTTCAGAAGGGGAAAAGACCTCAGTTGACTGATGAATTGGAGGCCTTGGACTCCTTTGCACAGTCTACAAGGTCTCCGTCTAATGATTACCAGGAACCATCGGATGCGGAAACCATTAAATTTCTTGTTGATTTGTTCCATAAATGTACAGAACCAATTCCAACTAAACGTCCAACAGCGCAAGACATCTACGATATGGTCGTGGCGCAAACAAGGTGTTGTGCAGGTTCAAGTATTGAATGA 3354 0.4192 MQLANQSEETVPEAPEFQKKIEEEQSLTRTENCGNTYDDLVVDVSGRSFEFPVLENASEHTTAGSLYLYKNAYSLIPKSSVKLCSLKTLKFFGNEVNLFPSELRSFTGLECLQMKISSPGFGGLPLHKLKGLKELELSEVPRRPSAFQILSDIAGLKCLTKLSVCHFGIRYLPPEIGCLRNLEYLDLSFNKIKTLPCEIGCLTALMLLKVAYNKLVEVPSALRYLTRLECLDLSNNRLTSLASLDLGMMHKLQNLNLQYNKLLSALEIPSWINCTMEGNGVHLHPDDFSSTSVEMEVYEGNWQEDDRSPSHKGPQCLSSNLLTSNSSNSRCFGARRSGRRWKRRTYLQQKARQERLNNSRKWKGMDHTELSTAKSGVICKLGDDALTPEPCSQAATDIVDKDADDRNILTGQSKDNKLCDDVAGDRLLQNGTSIEAEVCSCTSLETTVPSKYELQAIVASPDSSEVEHVEGSWDVLKFSSKTKRNYEQDLDNPKPCKFRRPVDESSVLSCKYSKVSFCGIEDHIPDGFYDAGRDRPFMPLENYEQNQCLSAREVILLDRKRDEELDAITLSAQALVKHMNELTRCCDHAAVCDLQIATFLAFFVSDHFGGSDRSGVIEKTRKSVSGSNYQKPFICTCSTGSSDGNVFFPKEIVKSVDDIFSDICEKSLHSIKNRQNSIIVPIGALQYGICRHRALLMKYLCDRMEPPIPCELVRGYLDFMPHAWNVVLIQKANKLVRMIVDACRPHDIREETDPEYFCRYIPLSRSKVPLATSSDAVPGCSFLPASSSEEIEKAPSSTLVRSRLGSLEVAAKVRTLKVDGSSANEIRNFEYNCLGEVRILSALRHSCIVELYGHHLSCKWTPLVDEHQGCRTLQSAIVMEYVKGGSLKNYLEKLLKEGEKHAPWDLAMSVARDVSCALAELHSKHIIHRDIKSENILIDLENRRDDGAPIVKLCDFDRAVPLRSMLHTCCIAHKGVPPADVCVGTPRWMAPEVMRAMYKPNAYGVEVDIWSYGCLILELLTLKVPYSGLSESQIHDHLQKGKRPQLTDELEALDSFAQSTRSPSNDYQEPSDAETIKFLVDLFHKCTEPIPTKRPTAQDIYDMVVAQTRCCAGSSIE* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00936 1117 ProSiteProfiles Leucine-rich repeat profile. 227 248 IPR001611 GO:0005515
Pte3g00936 1117 SMART LRR_sd22_2 225 246 - -
Pte3g00936 1117 SMART LRR_sd22_2 179 201 - -
Pte3g00936 1117 MobiDBLite consensus disorder prediction 302 321 - -
Pte3g00936 1117 PRINTS Leucine-rich repeat signature 182 195 - -
Pte3g00936 1117 PRINTS Leucine-rich repeat signature 225 238 - -
Pte3g00936 1117 Pfam Protein kinase domain 819 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00936 1117 SMART LRR_typ_2 179 202 IPR003591 -
Pte3g00936 1117 SMART LRR_typ_2 225 248 IPR003591 -
Pte3g00936 1117 SUPERFAMILY Protein kinase-like (PK-like) 800 1104 IPR011009 -
Pte3g00936 1117 FunFam Leucine-rich repeat protein kinase family protein 831 1110 - -
Pte3g00936 1117 SMART serkin_6 799 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00936 1117 MobiDBLite consensus disorder prediction 1 29 - -
Pte3g00936 1117 Gene3D Transferase(Phosphotransferase) domain 1 787 1111 - -
Pte3g00936 1117 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Pte3g00936 1117 Pfam Ethylene-responsive protein kinase Le-CTR1 658 741 - -
Pte3g00936 1117 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 109 1111 - -
Pte3g00936 1117 MobiDBLite consensus disorder prediction 13 27 - -
Pte3g00936 1117 ProSiteProfiles Protein kinase domain profile. 785 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00936 1117 SUPERFAMILY L domain-like 65 275 - -
Pte3g00936 1117 Gene3D Ribonuclease Inhibitor 25 294 IPR032675 -
Pte3g00936 1117 ProSiteProfiles Leucine-rich repeat profile. 181 202 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00936 Pte-Chr3 7844932 7851798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00936 836 1102 MAP Kinase Kinase Kinase AT1G63700 29.213 2.93e-21 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Pte3g00936 Pkinase 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00936 - - qsa:O6P43_021520 1370.91