Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00935 ATGGAAGGCGGCACTACCACTATCCGCTCTATCCTCGACAAACCCCTCAACCAACTCACTGAAGATGACATTTCTCAGCTCACCCGTGAAGACTGTCGCAAATTCCTCAAAGAGAAAGGTATGAGGCGGCCGTCATGGAACAAATCACAGGCGATCCAGCAGGTTATCTCACTTAAAGCTTTGCTTGAACCTACTGATGACGATTCTGGCGCCGGGTCTTTGCGGAAGCTCGCTTTTGCTTCATTACCTCAACATAGTACTCCCCGAGGGAATTTGGTATCAGTAAATTGTGTTAAAGGACTTAGTAGTGATACAAAGCTCTTGGAACTAGCTGAAGAACCAGTGTTACAAAAAGGGGAAGAAGCAAGAAAATCGGGTTCATCTGGGGACAGACCAGCGGGTGCTGACATAAATGAGAATGCCATCAGCCCAAGGACATGTGCAACCAGTGCCTCAATTGGTCAAATGACAATTTTCTATTGTGGCAAGGTAAACGTTTACGATGGAGTACCACTTGATAAGGCACAAACGATTATGCACCTGGCAGCCAGTCCACTCCATTCACTACAGAATAACCCATTGAATAATTGTGCAGTAGCGAAGACTTCTTTGTGTCAACCACAGACGTCAGTTGGACGAGACACTGCTGTTCATCAGGAAGCCACAATCTCCCAAACAGCTCAACCTGAGAGAATGGCAGAATATCCTTTTCAGTACAAAGAGAAAGCAAGCATGCCCCATGATGCAGATATAGAGGGTCAGGCAAGCAGAAAGGTGTCAGTGCAGAGATATCTTGAAAAGAGAAAAGACAGGGGACGGATAAAGAACAAGAAAATTGCAGGATCAAGAACGTCAAGCTTGGAAATTTACTTGAACGGCCAACTAAGATCCAATGACTCAAATAGGAATTCAGGCCGCAGTAGTACGGATTCTCCAACTCAGCCTGCTATCCCACAACTCTCAGGTAGCTCAACCGACAATCAGCTCAAGGTTGCTCTTACAGTAGATCTCAATGACAAAGTTATCCAGCAAATTTGA 1038 0.4547 MEGGTTTIRSILDKPLNQLTEDDISQLTREDCRKFLKEKGMRRPSWNKSQAIQQVISLKALLEPTDDDSGAGSLRKLAFASLPQHSTPRGNLVSVNCVKGLSSDTKLLELAEEPVLQKGEEARKSGSSGDRPAGADINENAISPRTCATSASIGQMTIFYCGKVNVYDGVPLDKAQTIMHLAASPLHSLQNNPLNNCAVAKTSLCQPQTSVGRDTAVHQEATISQTAQPERMAEYPFQYKEKASMPHDADIEGQASRKVSVQRYLEKRKDRGRIKNKKIAGSRTSSLEIYLNGQLRSNDSNRNSGRSSTDSPTQPAIPQLSGSSTDNQLKVALTVDLNDKVIQQI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00935 345 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 275 IPR040390 -
Pte3g00935 345 Pfam Jas motif 254 271 IPR018467 -
Pte3g00935 345 Pfam tify domain 155 183 IPR010399 -
Pte3g00935 345 ProSiteProfiles Tify domain profile. 149 184 IPR010399 -
Pte3g00935 345 MobiDBLite consensus disorder prediction 112 139 - -
Pte3g00935 345 MobiDBLite consensus disorder prediction 293 325 - -
Pte3g00935 345 SMART tify_2 149 184 IPR010399 -
Pte3g00935 345 MobiDBLite consensus disorder prediction 112 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00935 Pte-Chr3 7814041 7818573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00935 1 338 Tify Gene Family AT4G14720 46.571 1.51e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte3g00935 tify 8.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00935 - - qsa:O6P43_003318 400.979