Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00928 ATGCAGGGAATCAATGGCCGAAACAATGTAAGGAATCAAATACTGTACAATGCATGGAGAAAAGTGGACGAGGGGTACCTCTCAAAATTTAGTTCTGTACGACTTGAGAGCAGTCAAAGGGCACAGGACAAAATTGAAAGCATTGTCGATGAGGAGGCTATTCCTGTGGCCTCCACCTTTCTTCTGAGAAAACACAAGAGACAAAATACGTCAAAGTTTTCAACTTTCAAGAAATATTACAAAGAGGACCCGCAGGTAGTTTGGAAGTTGGAAGTCAAAGTACAGGTAGAACCGACAAGAAGGCAAACGGAAACACATATGATTGTACGTGCGAACACAGTGGACGAGGACAATAAAGTACAAAGAAATCGAAAGAAGATGGCAGCACTCTTCGAAGCTTTGCGTTGTACTGCATGCAATGAAGAGTGTAGTAAAGGTTTTTGCATTGGGCTGGACGAGGAGAAGGGAACTGAGTTGCTCGGTCTTGGTCGAGGACTCTGGGGACTTTCCCGGAGAACTGAAGGAAATGGCTCTCCGAGCAACGGCAATCAAATCGCTGAAGCTTCATACTTTTCAACGTTTTGTATTCATACATTAGGGTTTTGTTACAGCTGTTCTGAATTAACCATCTTCATCTTCCTTGAAGCCATCTTTGTCTTCCTTGCAGCCATCTTCGTCTTCCTAAACAGAGCTTCTGCTCCAAAGAGAACTTGCGATAGCCTTCGTCTTCCTTGCAGCAGCTTGGACTTAATGTTTAGAAGGAGACGACGTGAGTGGCTGGAGATTGGATGCTTCAGGTTGCAGAGACAAAGATGGATTCTCAGAGAGAAGGAGACGTACTTAGAAAGATGCTATTGGATAAATGCACGGACCCGTTCTAGAGAGAGAAAAAGTGAGAAAAAAGTGAGTGAGGGGATATCAAAAGGAGAGTTATGCGGAGGAAGTGCCTCTCCGGAAATGGACACACCAGAGAGGAATCAGATCGGGACACCCCTGTCTAAATTCGAGGAGTCGCCGGTCTTCAGCTATATTAACAATCTCTCTCCTATCAAACCGGTTAAGTCTGTGCACGTCACGCAGACTTTTAACTCGCTTAGCTTTTCATCTCCTCTTTCCGTTTTTGCATCGCCCCATGTCAGCTCTCTCAGAGAGTCCAGATTTCTTAGAAGCCACAACGTTGCAGATTTACCAAATCCTAAAGTTTTATCGGAAGATGAGAACAAAGTCTCCACCGAAGATGTTACCAATGATGCAACCAATACGTATGTCCGCTCAAATGAAGCGGTGGACAAGACTGATAAAGGGGTTTTAATAGGAGACTCCTCTCTAGAGCTACCTAAAGAAGATGCTGATTTCACAATTGAGCTGCCAAAAGAATTAAAGTATGAGTCTGGTAGCCCTGATTGTGAGCAGACATCGTTTTCTGAATATGAGAATAGTTCTTTGTTGCAATTTCCTAGCAAAGAAGTGTCTTTGGTTGCATCAGTTCCAGGAGCTGAAAATGAACCATATGAAGAGGAAGTACAAGTGGTGGAGATATCTGATATTTGTTGTGTTCAGCCCAAAGCGGAAGGTGCAGAATCGGTTTGGGAGGGTTTAATTTCTGATGCTCCGGATCTTTTAATGTTTAATTCCAAAAATGACACAGAAACTTTCAGGGCTCTCATGCATGGACCCTCAGATCCTGCCATGCGATTTTGCACTATTCTATCACAGTTATCACAGGATGATATCAATAGCCAGAAGCCACAAGTTATAGATCAGATTACATCGTCACAGTGTTCAACTGATTGCCATTCTTCTCATCCTGAAACAGTGTGTGAGCAGGTAGAACTTCACCAGAGTCTCCACACAAGGGACCGTCTGAATGCTGGAATAATGGATGTCAATCAAAGTGGGCAAATTGAAAATGAGTCTATCTTTATCATGCATCGTGGGTTGCGAAGGCGCTGTCTAGATTTTGAGATGACTGGAGGCCGGAAGAAGATCCCAGGTCAGGGTTCAAGTAGTGATTCTTCAATATTTCAATCTGACAAGAGAATTGCAACTATTGATATGCAGATAGTCCCTTCAAAGCGAAATGCAGATTCACAAAAGTGCATTTTGCCTGGAATTGGGCTTCACTTAAATTCACTTGCTAGGTTGAAAGATTACAGAGACATCAAGCATGAAAATTCGCAAAGCTCATGTTCTGCTATACATCTGGAGGCAGCAAGTCAAGAACATCCGTTGTCAGTTTTAACACCTTCTGAAAGAGACATAGAGCCCAATGAGAATGATGCTCAACTGCCAGAAGATGGTTCCCAACCATATATTAGTTCACTTGCTGAAGATTTCAGTCAGAACAACCCCAAAAAGAAAAGATGCAAAGTAGAATCTGAAGGAGAAAATGAGGGCTGCAAGCGTTGTAACTGTAAGAAATCCAAGTGTCTGAAGCTGTACTGTGAGTGCTTCGCTGCTGGTGTTTACTGCATAGAGCCCTGCACTTGTCAAGATTGCTTCAACAAGCCTATTCACGAAGATAGAGTTCTGGAAACTCGCAAACAGATTGAGTCTCGCAATCCCCTTGCATTTGCTCCAAAAGTAATTAGGAGCACTGATTCTGTTCCTGAAATAGGGGATGAATCAAACAAAACTCCAGCCTCAGCACGCCACAAAAGGGGATGCAACTGCAAGAAATCCAATTGCCTAAAGAAATACTGTGAATGCTATCAGGGTGGTGTTGGATGCTCTGTTAACTGCAGATGTGAAGGGTGCAAGAATACATTTGGTACAAAAGAAAGTTCTATTGGTATTGAAGCTGAACCAGAGGAGGCAGAAACATGTGATCATAGTACGGTAGAAATGAAGACGGATATTCAGAATAATGAAGAGCACTTGGCTGCAACCCCACTACGGCATTGCAGATCACTGGTTCCTTTGCCCTTTTCGTCCAAAGGGAAACCACCAAGATCTACTTTTGTTACTAGAGGATTGTATGCGGGGAATCGACTAGGGAAGCCAAATGTTCTTGTATCGCAACAGAATGTAGAGAAGCATTTGGAAACGGTTCCAGATGATGAAATTCCAGAGATTTTGAGGGGGCACGGGTCTCCTGTCAATGGTACCAAAAGTTCTCCAAATGGCAAGAGGGTGTCACCTCCTCATTGTAACTTTGCAGGATCTCCTACTCGTAGGAGTGGCAGGAAGTTGATATTACTATCTATACCCTCATTCCCTTCTCTCACTCACCAACAAATCTAA 3243 0.4332 MQGINGRNNVRNQILYNAWRKVDEGYLSKFSSVRLESSQRAQDKIESIVDEEAIPVASTFLLRKHKRQNTSKFSTFKKYYKEDPQVVWKLEVKVQVEPTRRQTETHMIVRANTVDEDNKVQRNRKKMAALFEALRCTACNEECSKGFCIGLDEEKGTELLGLGRGLWGLSRRTEGNGSPSNGNQIAEASYFSTFCIHTLGFCYSCSELTIFIFLEAIFVFLAAIFVFLNRASAPKRTCDSLRLPCSSLDLMFRRRRREWLEIGCFRLQRQRWILREKETYLERCYWINARTRSRERKSEKKVSEGISKGELCGGSASPEMDTPERNQIGTPLSKFEESPVFSYINNLSPIKPVKSVHVTQTFNSLSFSSPLSVFASPHVSSLRESRFLRSHNVADLPNPKVLSEDENKVSTEDVTNDATNTYVRSNEAVDKTDKGVLIGDSSLELPKEDADFTIELPKELKYESGSPDCEQTSFSEYENSSLLQFPSKEVSLVASVPGAENEPYEEEVQVVEISDICCVQPKAEGAESVWEGLISDAPDLLMFNSKNDTETFRALMHGPSDPAMRFCTILSQLSQDDINSQKPQVIDQITSSQCSTDCHSSHPETVCEQVELHQSLHTRDRLNAGIMDVNQSGQIENESIFIMHRGLRRRCLDFEMTGGRKKIPGQGSSSDSSIFQSDKRIATIDMQIVPSKRNADSQKCILPGIGLHLNSLARLKDYRDIKHENSQSSCSAIHLEAASQEHPLSVLTPSERDIEPNENDAQLPEDGSQPYISSLAEDFSQNNPKKKRCKVESEGENEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCTCQDCFNKPIHEDRVLETRKQIESRNPLAFAPKVIRSTDSVPEIGDESNKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSVNCRCEGCKNTFGTKESSIGIEAEPEEAETCDHSTVEMKTDIQNNEEHLAATPLRHCRSLVPLPFSSKGKPPRSTFVTRGLYAGNRLGKPNVLVSQQNVEKHLETVPDDEIPEILRGHGSPVNGTKSSPNGKRVSPPHCNFAGSPTRRSGRKLILLSIPSFPSLTHQQI* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00928 1080 MobiDBLite consensus disorder prediction 750 770 - -
Pte3g00928 1080 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 801 836 IPR005172 -
Pte3g00928 1080 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 887 922 IPR005172 -
Pte3g00928 1080 MobiDBLite consensus disorder prediction 1023 1057 - -
Pte3g00928 1080 ProSiteProfiles CRC domain profile. 799 924 IPR005172 -
Pte3g00928 1080 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 320 1076 IPR044522 GO:0003700
Pte3g00928 1080 SMART CXC_2 798 839 IPR033467 -
Pte3g00928 1080 SMART CXC_2 884 925 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00928 Pte-Chr3 7744536 7761377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00928 320 1079 CPP Transcription Factor Family AT3G22780 42.231 3.92e-147 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pte3g00928 TCR 2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00928 - - qsa:O6P43_003327 823.542