Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00927 ATGAATGGCAGCGGAAGAATCGGCAGTAAGGATATGATTTTCAGGGCTGACAAAATTGATCTAAAAAGCCTAGATACTCAGCTGGAAAAGCACTTGAGCAGGGTTTGGTCCAAGGAATTTGGCAACCAAAGGCCTAAAGAAGAGTGGGAGATTGATTTATCTAAGTTGGATATAAGATATGTTGTAGCTCATGGAGCCTATGGAACTGTTTACAGGGGATCATATGATGACCAAGACGTTGCAGTGAAGGTGTTGGACTGGGGTGAGGATGGTATTGCCACAACTTCCGACACTGCTGCTTTACGTGCATCATTTCAGCAGGAGGTTGCTGTTTGGCACAAACTAGACCATTCAAACGTTACAAAATTTGTCGGAGCTTCAATGGGAACTTCAAATCTTAGGATTCCTTCTAAAAACTCTTCAGCAGATGGTCAGAGTTCCCTGCCTTCTAGGGCCTGCTGTGTTGTTGTAGAGTATGTTGCTGGTGGAACCCTGAAACAATTCTTGATAAGAAATAGGAGAAAAAAACTTGCTTTTGAGGTTGTCATCCAGTTGGCTCTTGATCTTTCTAGAGGTCTGAATTATCTGCATTCAAAGAAGATTGTACATCGTGATGTCAAAACTGAGAACATGTTGCTAGATGTTTATAGAAATTTGAAAATAGCCGATTTTGGTGTGGCTCGTGTGGAAGCTCAGAATCCAAGAGACATGACAGGGGAAACGGGTACCCTTGGATACATGGCTCCCGAGGTTCTAGATGGTAAGCCATACAATAGAAGATGTGATGTCTACAGCTTTGGGATATGTCTGTGGGAAATTTATTGCTGTGACATGCCTTTCCCTGATCTAAGCTTTGCTGAAATGTCATCAGCAGTTGTTCGGCAGAATCTACGCCCGGAAATTCCCAGATGCTGCCCAAGTTCTTTAGCAAACATCATGCGAAGATGCTGGGATCAAAATCCAGACAAACGTCCAGAAATGGATGAAGTTGTGAGAATGTTAGAAGCAATTGACACCAGCAAAGGAGGAGGGATGATACCAGAGGACCAGGCCCCTGGCTGTTTCTGCTTTTTTGCACCTAGTCGTGGTCCTTGA 1095 0.4374 MNGSGRIGSKDMIFRADKIDLKSLDTQLEKHLSRVWSKEFGNQRPKEEWEIDLSKLDIRYVVAHGAYGTVYRGSYDDQDVAVKVLDWGEDGIATTSDTAALRASFQQEVAVWHKLDHSNVTKFVGASMGTSNLRIPSKNSSADGQSSLPSRACCVVVEYVAGGTLKQFLIRNRRKKLAFEVVIQLALDLSRGLNYLHSKKIVHRDVKTENMLLDVYRNLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPFPDLSFAEMSSAVVRQNLRPEIPRCCPSSLANIMRRCWDQNPDKRPEMDEVVRMLEAIDTSKGGGMIPEDQAPGCFCFFAPSRGP* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00927 364 SMART serkin_6 56 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00927 364 FunFam Serine/threonine-protein kinase HT1 160 345 - -
Pte3g00927 364 Pfam Protein tyrosine and serine/threonine kinase 60 334 IPR001245 GO:0004672|GO:0006468
Pte3g00927 364 Gene3D Phosphorylase Kinase; domain 1 45 138 - -
Pte3g00927 364 CDD STKc_MAP3K-like 62 334 - -
Pte3g00927 364 SUPERFAMILY Protein kinase-like (PK-like) 39 334 IPR011009 -
Pte3g00927 364 FunFam Kinase suppressor of Ras 1 45 140 - -
Pte3g00927 364 PIRSF ILK 145 343 - -
Pte3g00927 364 PIRSF ILK 22 143 - -
Pte3g00927 364 PRINTS Tyrosine kinase catalytic domain signature 305 327 IPR001245 GO:0004672|GO:0006468
Pte3g00927 364 PRINTS Tyrosine kinase catalytic domain signature 195 213 IPR001245 GO:0004672|GO:0006468
Pte3g00927 364 PRINTS Tyrosine kinase catalytic domain signature 261 283 IPR001245 GO:0004672|GO:0006468
Pte3g00927 364 PRINTS Tyrosine kinase catalytic domain signature 157 170 IPR001245 GO:0004672|GO:0006468
Pte3g00927 364 ProSiteProfiles Protein kinase domain profile. 56 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00927 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Pte3g00927 364 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 47 338 - -
Pte3g00927 364 Gene3D Transferase(Phosphotransferase) domain 1 162 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00927 Pte-Chr3 7740678 7744248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00927 5 365 MAP Kinase Kinase Kinase AT3G22750 79.282 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pte3g00927 PK_Tyr_Ser-Thr 1.8e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00927 - - jre:108989477 656.751