Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00920 ATGGGGTTCGTATTTGTATTACTAATAATACATATACACAACACAAACATGTATGTGCAGGAATCAGAGGATGATGACAATTTCTCCGATCAAGGCGATCTGAATTCTACCGATCTTCAAGTTGATGATCATGACACGGAAACCTCATCTCAAGAGACGATGAGTTCAGATGAATTCACTCAGAAACTGATTGATCTTTCAGCCCTTGTCCCCGGTTCAAACAAGATAAACGAGGTTTCAGTTATTTCGAAGACTATCAAGTACTTGAAGGAGCTTCATGAAACTATTACGTTGTTGGAAGATAAGGCGGGGATAGAGCATGACGAGGCAGCTCCATCGAACAACAAAACTAAAGCGTCGACCGATAAAGATGTCTCTGACATCACTTCCAATCGTAAGAATGAAGAAAACTCTGGTCATGATGAGATCAGTACTACCAGTGAGATACTGCCAGAAATAGAAGCAAGATTCTTGAACAAAGAAGTGCTTGTTCGGATTCACTGCATGAAATCCAAAGGACTGATTGTCGACATTCTCAACCACTTGGAACACCTTCATCTATCAGTGATCCGTAACAGTGTTCTCCATTTTGGAGACTCCCGTTTCGAGATAAGCATTATTGCACAGATGGAAGATGGATTTATCATGACTGGCGAGGAGTTAGCTAGAAGCCTGAGGACTATCTTTCCATCTATTTGA 699 0.4106 MGFVFVLLIIHIHNTNMYVQESEDDDNFSDQGDLNSTDLQVDDHDTETSSQETMSSDEFTQKLIDLSALVPGSNKINEVSVISKTIKYLKELHETITLLEDKAGIEHDEAAPSNNKTKASTDKDVSDITSNRKNEENSGHDEISTTSEILPEIEARFLNKEVLVRIHCMKSKGLIVDILNHLEHLHLSVIRNSVLHFGDSRFEISIIAQMEDGFIMTGEELARSLRTIFPSI* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00920 232 Gene3D - 56 102 IPR036638 GO:0046983
Pte3g00920 232 MobiDBLite consensus disorder prediction 107 144 - -
Pte3g00920 232 MobiDBLite consensus disorder prediction 37 51 - -
Pte3g00920 232 MobiDBLite consensus disorder prediction 120 142 - -
Pte3g00920 232 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 59 102 IPR036638 GO:0046983
Pte3g00920 232 PANTHER BHLH TRANSCRIPTION FACTOR 58 228 - -
Pte3g00920 232 MobiDBLite consensus disorder prediction 23 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00920 Pte-Chr3 7695154 7697607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00920 19 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 31.429 9.47e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00920 - - jre:108985363 137.502