Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00907 ATGCAAAAATACACAAAATACATTAAATTCAACTTGAAAATAAATGAGCTTTATAGGATTCCACCCTCAATTCTTTTTAAGAAAAATTATAGATATGTTGGTATTATGAAGAAGATGGTTTGGTCGTCGAGACCTCAAAGCAAGGGAAGAGGGGCACCGGCGAAAGAAATGGACGGTGGTATGAGATCAGGCGGCCCTTCTGGGGTTTTTGTGAAGAATAGGAACTCTTCAGGTTGCTTGATTGTTAGGAAGAAAGGGGATGGGTTGGCTGGTGCGGTTGGCTCATCAAGCTCTAGAAGTTTCGTGGACCCAAGGAGGGAGAAGAGAAGACCCAGTGCGGTTATGAGTGACTCTGGGTCAAGCGACGAGTTGTTGATGCCTTCACGTAAGAGGGCTGGCCCTGAAACTATTACAGCTTGTAATGGTCTGGCCCCTTATGACAAGGCAGTTGTAGAAGACAGTGGAATTCCCAGAAAAAGAGAAAGGTTGGAGCAACTTACTCATAATGAGGATGGTTTGCTTGGTATGCGTGGCTATGAGGAAAGAGAAAAGAAGAGGGGTAAATTAGATGTGTTTGATTTTGATGAATATGATGGGATTGATGGAGATCACATGCGGAGGAAGCGACCTGATGATGGTGCAGCTGCATTTGGGGAGAGAAGGATTAAGGGATCCATGCCAGTTGACCGGATTAGCAATGTGGGGGAATATGAGTCTGGTCCAAGCAAGTACAGGATTGATGGTTTGAATTTGGGAGACAGTGTTGATCGAAGTAGGTTGAAGATGAAAAGGGATCGAGATCAGGTACCTAAACCTATGTTAAAAGAGCAGTACATGACTAGGCTGGACAAAGCAATTAGAGTTCAAGGTAAAAGTGGTGTTCTGAAGGTATTGGTAAACAAAAAGAAGATTGGTGGTGGATCACCATTTGAACACGTTGATCGTCTCAAACCTGTGGTAAGCAGACGGACCTTGAAAACTGAAGGTAGCTCCAAGAGAAATACTCACTTGCATCCTCATTTGCAACCGGTAGCTAAACTTGTTGATAGACCTGATTTGGTTGTTAGAGCTGAAAAAAGTCAATGGGTTCACAAGAAATCAATGTCAAGTAAGGAAAGTGATGAGAATGAAAGGAACTCAGAGAATAGTGACACATCACTGAAGCTAGGTTCAAAAAATGTTCATGCTCGCAAGTATGTCAATAGGGAAAGTTATGAGGATGAACCAAGGTTGAAGAATGTTCATGCTTACAAATCTACTAAGAGGGTAACTTCTGAGGATGAATTGACCCCTGTGCAAGAAAAGCTCCTGACAGGAGGAACAAACGAAGGCAAAGTCAAACGTGGTAGTGGGACAGAGAAACAAAAATTACGCGAACAGATTAGAGGAATGCTTCTTGATGCGGGGTGGACAATAGACTATCGACCTAGAAAGAATAGAGATTACCAAGATGCTGTGTACATCAATCGTAGTGGAACAGCATACTGGTCAATCATAAAGGCCTATGAGGCGCTGCAAAAGCAATTGAATGAGGATAAGAAAGAGGTCAAGCACAGTGGTGATGTTGGTTCTTCCTTTGCTCCTATAGCTGATGACGTACTCAGTCAATTAACTAGGAAAACTCAGAAGAAGCTGGAGAAAGAAATGAAGAAAAAGAGGAAGACTGAAGTTGACAGTGAGATTGCCAAAGAAGCTCATCATCAGCACCATATGGATGGTGTTGATAGCAACAGCCGTGAAGAGAAACTAAACATCTTCATGAAGCAGGGGGCTAAACCATCTAAAAGTAAAATGAATGAAAATGGTGCTCGCCGCATAAATTCTAGATCCCATAATGAATTCAAGGATGGTACAGAAAGGCGATCTTCTGAATCAGATTCTCATTTGGGACATGAGCTGAAGAGTAGAGAACATAGCCGATGTGCTTTGTTGGTTCGTGGCTCCAACAAGGGATTAAATTCAGAATTTGACGACTTTGTTCCATATCCTGGCAAACGCACTATCCTTTCCTGGCTAATAGATTCTGGAACGGTGCAATTAAGCCAAAAAGTGCAGTATCGTCGACGAAAGCGAGTATTGCTAGAGGGTTGGGTCACAAGAGATGGCATTCATTGTGGCTGCTGTAGTAAAATCCTTACAGTTTCAAAATTTGAGATTCATGCTGGAAGCAAATTGCAGCGCCCATTTCAACGCATATTTCTGGAATCTGGCGATTCTCTATTGCAGTGCCAGCTAGATGCATGGAATAGACAAGAGGGTTCTGAAAAAATCAGGTTCTACTCTGTGGATGTTGATGGTGATGATCCAAACGATGATACATGTGGCATATGTGGAGATGGTGGGGATTTGATTTGTTGTGATGGATGCCCATCAACATTTCATCTGAGTTGCTTGGACATAGAGAAGCTTCCACCTGGTGAATGGCACTGTCCAAACTGTTCTTGTAAGTTTTGTGGATTAGCCAGTGGAGCTGTCAATCAAGAATATGAGAAGAAGATGGCTTCTACACTATGCATATGCAACTTGTGCGAGAAAAAATATCATGAATCATGTATCGAGGATATGGATACCAGTCTGACTGATTCTGATCTTCCGCCCCTTGCTTTTTGTGGAAAAGATTGTAAAGAGCTTTTTTGGCACATGAAGAAGTATCTTGGTGCCAAACATGAATTGGAAGCAGGCTTTTCTTGGTCTCTTCTCCATCGCACTGATGAAGACTCAGATGCAGCTTTTAGAGGAATATCCCAACGCGTGGAATCTAACTCTAAGCTAGCTGTTGGACTGGCTATAATGGATGAATGTTTTTTGCCAATTGTTGACAGGAGAAGTGGTATCAATCTAATTCAAAACATTCTTTATAATAGCGGATCAAACTTCAACAGATTAAATTATAAGGGTTTTTATGCTGCTGTTCTGGAGAAAGGTGATGAAATCATTTCTATTGCATCTATCAGGTTTCATGGTACTAAGTTGGCAGAAATGCCATTCATTGGTACTCGCCATATATATAGACGTCAAGGAATGTGTCGACGCCTATTATCTGCCCTTGAGTCGGCCCTGTGCTCTCTCAAGGTTGAGAGATTGATTATTCCTGCAATTGCGGAGCTCATGCACACTTGGACTGCAATTTTTGGTTTCACCCCTTTGGAGGAATCATTCAAGAAAGAAATGAGGTCGATGAATATGTTGGTTTTTCCTGGAGTGGATATGTTGCAGAAGCGAATGAATGCACAGGGTAAGGCTACTATTTCAGGGGGAAAGCAAATTGAAAAAGGAGAGAATCATTTGGCTGGTTGTGATGTGGTACATAAATTGGGTATGAATTCTTCTTACCCAGATGCTCATGGATGTGATGATGATAGTTCTCAACCCACCAATGAGAATATGGATGATGGTGCTGCCTCTGATTCTGGTTTCCAAAGTGAGGGTCTGCATACAAATGATACTTCTCATGCAACTGGGAATCTATTTACATCTGATGGGACTTTAAATTCTGACTCTGGGGCAATGCTCGCTGAATATGCTTCTCACAAGAAATCCACTACTCCTAGGATTGATCTTGTTGCAGTTGACAAGGAAGGCCTAGTGACTGATTCTCTTATAAAAGAGAATCTGTGTTCGTCTCCCCAGCTTCAAGGTGCTCCCATAAGTGACACTTTAATTGATAATCCAACGATCTCATCTGATGAGCATAAGGATCCAGTTCTGGCAAAAGAAAGTGCTTGCCATGGGCGAACGATAGTGGAGGCTGATTCTGACAATAAACTTGAGTCTCCCTCTGCTTCAAAAGATGGCTCCCCAGATACTGGAAAAAACCGAAACTATGATTCTCAAGTTAGTGCGAGCACTGACAGCAGCGATGCTGAGAGCTCCCTTGGACTTGTTGAATCGCTGCCCCCTTCTGTGGGCTTTTTTTCTACTAGCATCACGAAGGATGTCAGTGACGAACTAAATGTTTCTGATGGTGCTGTCAGAGGCGCTGATGAGAGTGTGATGCATGTAAGGTCTGATCTGAATGCAGAGTCATCTGAAGAAGGAACGGAATTGTATATACTATCCGAAGCCACTTCTTTTGAAACACATTGCGAGAAGGCCATTGACAAGTCTCACGGTGATCCTGGAAACAAAACATTATGA 4137 0.4247 MQKYTKYIKFNLKINELYRIPPSILFKKNYRYVGIMKKMVWSSRPQSKGRGAPAKEMDGGMRSGGPSGVFVKNRNSSGCLIVRKKGDGLAGAVGSSSSRSFVDPRREKRRPSAVMSDSGSSDELLMPSRKRAGPETITACNGLAPYDKAVVEDSGIPRKRERLEQLTHNEDGLLGMRGYEEREKKRGKLDVFDFDEYDGIDGDHMRRKRPDDGAAAFGERRIKGSMPVDRISNVGEYESGPSKYRIDGLNLGDSVDRSRLKMKRDRDQVPKPMLKEQYMTRLDKAIRVQGKSGVLKVLVNKKKIGGGSPFEHVDRLKPVVSRRTLKTEGSSKRNTHLHPHLQPVAKLVDRPDLVVRAEKSQWVHKKSMSSKESDENERNSENSDTSLKLGSKNVHARKYVNRESYEDEPRLKNVHAYKSTKRVTSEDELTPVQEKLLTGGTNEGKVKRGSGTEKQKLREQIRGMLLDAGWTIDYRPRKNRDYQDAVYINRSGTAYWSIIKAYEALQKQLNEDKKEVKHSGDVGSSFAPIADDVLSQLTRKTQKKLEKEMKKKRKTEVDSEIAKEAHHQHHMDGVDSNSREEKLNIFMKQGAKPSKSKMNENGARRINSRSHNEFKDGTERRSSESDSHLGHELKSREHSRCALLVRGSNKGLNSEFDDFVPYPGKRTILSWLIDSGTVQLSQKVQYRRRKRVLLEGWVTRDGIHCGCCSKILTVSKFEIHAGSKLQRPFQRIFLESGDSLLQCQLDAWNRQEGSEKIRFYSVDVDGDDPNDDTCGICGDGGDLICCDGCPSTFHLSCLDIEKLPPGEWHCPNCSCKFCGLASGAVNQEYEKKMASTLCICNLCEKKYHESCIEDMDTSLTDSDLPPLAFCGKDCKELFWHMKKYLGAKHELEAGFSWSLLHRTDEDSDAAFRGISQRVESNSKLAVGLAIMDECFLPIVDRRSGINLIQNILYNSGSNFNRLNYKGFYAAVLEKGDEIISIASIRFHGTKLAEMPFIGTRHIYRRQGMCRRLLSALESALCSLKVERLIIPAIAELMHTWTAIFGFTPLEESFKKEMRSMNMLVFPGVDMLQKRMNAQGKATISGGKQIEKGENHLAGCDVVHKLGMNSSYPDAHGCDDDSSQPTNENMDDGAASDSGFQSEGLHTNDTSHATGNLFTSDGTLNSDSGAMLAEYASHKKSTTPRIDLVAVDKEGLVTDSLIKENLCSSPQLQGAPISDTLIDNPTISSDEHKDPVLAKESACHGRTIVEADSDNKLESPSASKDGSPDTGKNRNYDSQVSASTDSSDAESSLGLVESLPPSVGFFSTSITKDVSDELNVSDGAVRGADESVMHVRSDLNAESSEEGTELYILSEATSFETHCEKAIDKSHGDPGNKTL* 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00907 1378 MobiDBLite consensus disorder prediction 88 128 - -
Pte3g00907 1378 CDD PHD2_CHD_II 774 813 - -
Pte3g00907 1378 MobiDBLite consensus disorder prediction 1209 1224 - -
Pte3g00907 1378 ProSitePatterns Zinc finger PHD-type signature. 774 813 IPR019786 -
Pte3g00907 1378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 763 862 IPR013083 -
Pte3g00907 1378 PANTHER PHD FINGER PROTEIN 12 383 1203 IPR042163 GO:0003714|GO:0045892
Pte3g00907 1378 MobiDBLite consensus disorder prediction 543 633 - -
Pte3g00907 1378 SUPERFAMILY FYVE/PHD zinc finger 756 815 IPR011011 -
Pte3g00907 1378 MobiDBLite consensus disorder prediction 1209 1235 - -
Pte3g00907 1378 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 914 1075 IPR000182 GO:0016747
Pte3g00907 1378 MobiDBLite consensus disorder prediction 43 66 - -
Pte3g00907 1378 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 962 1053 IPR016181 -
Pte3g00907 1378 MobiDBLite consensus disorder prediction 1112 1154 - -
Pte3g00907 1378 Pfam PHD-finger 774 816 IPR019787 -
Pte3g00907 1378 Coils Coil 499 519 - -
Pte3g00907 1378 MobiDBLite consensus disorder prediction 543 586 - -
Pte3g00907 1378 MobiDBLite consensus disorder prediction 1259 1292 - -
Pte3g00907 1378 MobiDBLite consensus disorder prediction 598 633 - -
Pte3g00907 1378 Pfam Tify domain binding domain 696 745 IPR032308 -
Pte3g00907 1378 MobiDBLite consensus disorder prediction 359 382 - -
Pte3g00907 1378 MobiDBLite consensus disorder prediction 359 394 - -
Pte3g00907 1378 CDD NAT_SF 971 1030 - -
Pte3g00907 1378 MobiDBLite consensus disorder prediction 323 345 - -
Pte3g00907 1378 ProSiteProfiles Zinc finger PHD-type profile. 771 816 IPR019787 -
Pte3g00907 1378 SMART PHD_3 815 875 IPR001965 -
Pte3g00907 1378 SMART PHD_3 773 814 IPR001965 -
Pte3g00907 1378 MobiDBLite consensus disorder prediction 1115 1154 - -
Pte3g00907 1378 MobiDBLite consensus disorder prediction 1248 1293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00907 Pte-Chr3 7579029 7590922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00907 59 1077 PHD Transcription Factor Family AT4G14920 46.263 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pte3g00907 TDBD 5.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00907 - - qsa:O6P43_003370 1397.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00907 3 7579029 7590922 Pte3g00907 3 7579029 7590922 RCT