Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00904 ATGGCTGATCCTGCATACACTGTAGCATCTGATAGTGAAACCACTGGGGAGGAAAAATCATCTTCAACTTTTCCAGAAATTGCAATTGGAATTGACATCGGCACTTCACAGTGCAGTGTGGCTATCTGGAATGGCTCTGATGTGGAGCTCCTGAAAAATACCAGAAATCAAAAGATGATGAGATCATATGTGACCTTTAAGGACGATGTACCTTCGGGTGGAGTCAGCAGTCAACTTTCACATGAGAATGAGATGCTGTCAGGAGCAACTATTTTCAACATGAAACGTTTAATAGGCAGAGTTGACACTGACCCTGTGGTTCGTGCAAGTAAGAGTCTTCCCTTTCTGGTTCAAACGCTGGACATTGGAGTTCGCCCATTTATTGCTGCACTCGTAAACAATGTATGGAGATCAACAACTCCAGAAGAAGTCATGGCGATATTTCTGGTGGAATTAAGAGCAATGGCTGAAGTCCAGTTGAAACGACCTATAAGAAATGTTGTTCTCTCCATTCCAGTTTCTTTTAGTCGATTCCAGTTGACTCGTATTGAACGAGCATGTGCAATGGCAGGCCTTCATGTTCTGAGGTTGATGCCTGAACCTACAGCTGTTGCATTGTTATATGCGCAGCAGCAACAACAGACTGTACATGAAAATATGGGCAGTGGAAGTGAGAAGATTGCACTCATTTTCAATATGGGTGCTGGATTTTGCGATGTCGCCGTGAGTGCTACAGCTGGTGGTGTTTCACAAATAAAAGCTTTGTCAGGAGCTCCCATTGGCGGAGAAGACCTCCTCCAGAATATGATGCGTTACCTCTTGCCTGAATCAGAAATCCTTTTCTCTAACCATGGAATAAATGATATTCAGACATTGGGATTGCTTAGAGTTGCAACCCAAGATGCGATACACAAGCTCTCTTCGCAGACCAGTGTTCAAGTTGACGTTGAACTGGGAAATGGTACCAAAATATCGAAAGTGATCAAACGAGATGAATTTGTGGATGTGAACCGGAAGGTGTTCGAGAGGTGTGAAAGCATCATTATCCAGTGTCTGCATGATGCTAAGGTTGGAGTTGAGGATGTGACGGATGTAATAGCAGTTGGGGGATGCTCATATATTCCTAAGATAAAGGAAATAATCACGAGGATATGCAAGGGGAAACAACTTTACAAAGGGATGAATCCGTTAGAGGCAGCTGTCCGTGGCGCTGGGCTGGAAGGTGCTGTAGCTTCTGGTATCAGTGACCCCTTTGGGAATTTGGACTTGTTGACTATCCAAGTCACACCATTAGCAATTGGTATACGCGCTGATGGGAACCAGTTCGTTGCTATCATACCTAGAAATACTACAATGCCAGCGCGGAGAGAGCTTGTGTTCACAACTATCCATGATAACCAGACGGAGGCATTAATTATAGTGTACGAGGGTGAGGGAAGCAAGGTTGAAGAAAACCATTTGTTAGGTTACTTCAAAATCATTGGTATTCCTCCAGCTCCTAAAGGAGTCCCAGAGATTAATGTGTGCATGGATATAGATGCTTCCAATAGCTTGAGAGTTTTAGCTGGGGTTGCGATGCCTGGTTCTCAACATTCTGTTACTCCTGTTATGGAAGTTAGGATGCCAACAGTGGATGATGGACATGGCTGGTGTGCTGAGGCCCTCCATAGAAACTACGGTTCGACTCTGGATTTAGTGACTGTGCAGAAGAAAGTATAG 1719 0.4427 MADPAYTVASDSETTGEEKSSSTFPEIAIGIDIGTSQCSVAIWNGSDVELLKNTRNQKMMRSYVTFKDDVPSGGVSSQLSHENEMLSGATIFNMKRLIGRVDTDPVVRASKSLPFLVQTLDIGVRPFIAALVNNVWRSTTPEEVMAIFLVELRAMAEVQLKRPIRNVVLSIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQTVHENMGSGSEKIALIFNMGAGFCDVAVSATAGGVSQIKALSGAPIGGEDLLQNMMRYLLPESEILFSNHGINDIQTLGLLRVATQDAIHKLSSQTSVQVDVELGNGTKISKVIKRDEFVDVNRKVFERCESIIIQCLHDAKVGVEDVTDVIAVGGCSYIPKIKEIITRICKGKQLYKGMNPLEAAVRGAGLEGAVASGISDPFGNLDLLTIQVTPLAIGIRADGNQFVAIIPRNTTMPARRELVFTTIHDNQTEALIIVYEGEGSKVEENHLLGYFKIIGIPPAPKGVPEINVCMDIDASNSLRVLAGVAMPGSQHSVTPVMEVRMPTVDDGHGWCAEALHRNYGSTLDLVTVQKKV* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00904 572 PRINTS 70kDa heat shock protein signature 362 378 - -
Pte3g00904 572 PRINTS 70kDa heat shock protein signature 394 414 - -
Pte3g00904 572 PRINTS 70kDa heat shock protein signature 422 441 - -
Pte3g00904 572 PRINTS 70kDa heat shock protein signature 27 40 - -
Pte3g00904 572 PRINTS 70kDa heat shock protein signature 503 519 - -
Pte3g00904 572 FunFam Heat shock 70 kDa protein 8 92 147 - -
Pte3g00904 572 MobiDBLite consensus disorder prediction 1 22 - -
Pte3g00904 572 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 422 538 IPR029047 -
Pte3g00904 572 PANTHER HEAT SHOCK PROTEIN 70KDA 28 522 IPR013126 GO:0005524|GO:0140662
Pte3g00904 572 Gene3D Actin; Chain A, domain 4 262 343 - -
Pte3g00904 572 SUPERFAMILY Actin-like ATPase domain 225 412 IPR043129 -
Pte3g00904 572 CDD HSP70_NBD 29 409 - -
Pte3g00904 572 Pfam Hsp70 protein 28 533 IPR013126 GO:0005524|GO:0140662
Pte3g00904 572 FunFam Heat shock 70 kDa protein 8 262 343 - -
Pte3g00904 572 Gene3D - 29 408 - -
Pte3g00904 572 Gene3D - 213 391 - -
Pte3g00904 572 MobiDBLite consensus disorder prediction 8 22 - -
Pte3g00904 572 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 419 545 IPR029047 -
Pte3g00904 572 FunFam Heat shock 70 kDa protein 8 417 532 - -
Pte3g00904 572 SUPERFAMILY Actin-like ATPase domain 27 210 IPR043129 -
Pte3g00904 572 Gene3D - 92 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00904 Pte-Chr3 7565083 7568282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00904 28 534 Calmodulin-binding Proteins AT3G12580 36.486 2.91e-99 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00904 K09489 - pvy:116119688 969.148