Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00888 ATGGCGGAGGTGGAGGGCATTGTCGGTTTCCTCCTCATCATGCTGCTGCTGTTGATCGTCGTTCTCATATTCTTAGCCTGCAAACCATGGCGTCTACTCTACTCTGCTCGTTCTCGCCCAATCAAGACTGGAGACCTAGAGAGCCCCCTTGTTTCAGAAGAAACAAACCTACTGAGAAACCAAGGCAATGAATTGCCGAGGGATTATGATCTGGAGGGAACTTATATTCAAAATGAAACGCATTTTCGATCACCTCAAACACATGGAATCGTTCAGAAGCAGAGGGTTCGCTCCGTATCTCCTCATGTGGTTCAAGGAGAAAACTTAGTTTTAGATATAGATAGTGATCCCTCGGAAGATGTAGCAGTTGGTCAGACACTTAAGTTGCCAGCTGCTAAGTTGGCTGAACTCCAAAAGCAAAGCAGACAGAATAGAGAAAACAATGAATCGCAAGAATACAGATACGAGGATATCTCAAATCAAAGCAGCTGCCTCACACTGGAGATCATCTCTGGTCCTTCTTGTGGGGTCCGTCTTAGTCTACTGTCAACAAATACCTCAAAACTTCCATTGACTCTTGGAAGGGTTTCCCCCAGTAACTTGTTGCTAAAGGACTCGGAGGTTTCAGGAAAGCATGCCTTAGTAAATTGGAATCTCGATAAAATGAAATGGGAAGTGACAGATATGGGCAGCCTGAATGGCACACTTTTGAATTTTCGGTCAATTAATCATCCTGATTCTAGTACCACTAGACATTGGGGTGCTCCAGTTGAGCTGCGAAATGGAGACATCATAACTCTAGGAACAACATCAAAAGTATTAGTTCACATTACTTCTGAAAATGTGCATCAGATACCCTTTGGTGTTGGTATGGCATCAGATCCCATGGCTTTACGTCGAGGAGGAAAAAAGCTGCCTATGGAAGATGTATGCTATTATCAGTGGCCACTTCCCGGTATCGATCAGTTTGGACTTTTTGGTATTTGTGATGGCCATGGTGGTGTTGAGGCTGCAAGATCTGCTAGCAAACTTTTCCCAGATAAGGTTGCTAGTATTCTGTCAGATTCCACTAAAAGAGAAAGGGTTTTGTCACATTGTGATGCCTCAGATGTTCTAAGGGATGCATTTTCACTAACTGAAGCATGTATGAATCATCACTATGAGGGTTGTACAGCAACAGTACTTCTGGTGTGGGCTGATAGCAATGAGAAGTTCTTTGCTCAATGTGCAAATGTTGGGGATTCTTCTTGTTTCATGAATGTTGATGGGAAACAAATCAAGATGACAGAAGATCATAAGGTATCTAACCATTCTGAGAGATTACGGATTGAGGGAATTGGAGAACCATTGAAAGATGGGGAGACCCGGCTATGTGGTTTGAACCTCGCACGTGTGCTTGGGGACAAGTTTCTTAAACAGCAAGATTCCAGGTTCAGCGCAGAGCCTTATATAAGTCCGGTTGTCCATATTGATCCCTCATGCAGAGCTTTTGCAATTTTGGCAAGTGATGGTTTGTGGGATGTCATCAGCATGAAGAAGGCAACTCAGTTAGTCCTTCAGATGAGGGGAAAACATTATACAGAGGAGGAGAATTCTGCTCAGAAAGTAGCTAGTTTTTTGGTGAGTGAAGCGAGGACACATAAAACAAAGGACAATACCTCTGTAATATTCTTAGATTTTGATACCACTGAATTTTCTTGTAAACTTGTATCCTAA 1716 0.4295 MAEVEGIVGFLLIMLLLLIVVLIFLACKPWRLLYSARSRPIKTGDLESPLVSEETNLLRNQGNELPRDYDLEGTYIQNETHFRSPQTHGIVQKQRVRSVSPHVVQGENLVLDIDSDPSEDVAVGQTLKLPAAKLAELQKQSRQNRENNESQEYRYEDISNQSSCLTLEIISGPSCGVRLSLLSTNTSKLPLTLGRVSPSNLLLKDSEVSGKHALVNWNLDKMKWEVTDMGSLNGTLLNFRSINHPDSSTTRHWGAPVELRNGDIITLGTTSKVLVHITSENVHQIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGIDQFGLFGICDGHGGVEAARSASKLFPDKVASILSDSTKRERVLSHCDASDVLRDAFSLTEACMNHHYEGCTATVLLVWADSNEKFFAQCANVGDSSCFMNVDGKQIKMTEDHKVSNHSERLRIEGIGEPLKDGETRLCGLNLARVLGDKFLKQQDSRFSAEPYISPVVHIDPSCRAFAILASDGLWDVISMKKATQLVLQMRGKHYTEEENSAQKVASFLVSEARTHKTKDNTSVIFLDFDTTEFSCKLVS* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00888 571 FunFam Protein phosphatase 2C 70 160 295 - -
Pte3g00888 571 SUPERFAMILY PP2C-like 301 561 IPR036457 -
Pte3g00888 571 PANTHER PROTEIN PHOSPHATASE 2C 245 557 IPR015655 GO:0004722|GO:0006470
Pte3g00888 571 FunFam Protein phosphatase 2C 70 296 566 - -
Pte3g00888 571 SMART PP2C_4 282 558 IPR001932 -
Pte3g00888 571 Pfam Protein phosphatase 2C 299 553 IPR001932 -
Pte3g00888 571 SUPERFAMILY SMAD/FHA domain 163 275 IPR008984 GO:0005515
Pte3g00888 571 ProSiteProfiles PPM-type phosphatase domain profile. 288 560 IPR001932 -
Pte3g00888 571 SMART FHA_2 190 242 IPR000253 GO:0005515
Pte3g00888 571 ProSiteProfiles Forkhead-associated (FHA) domain profile. 191 242 IPR000253 GO:0005515
Pte3g00888 571 ProSitePatterns PPM-type phosphatase domain signature. 325 333 IPR000222 GO:0043169
Pte3g00888 571 Gene3D - 159 296 - -
Pte3g00888 571 Gene3D - 297 568 IPR036457 -
Pte3g00888 571 CDD PP2Cc 300 560 IPR001932 -
Pte3g00888 571 Pfam FHA domain 192 268 IPR000253 GO:0005515
Pte3g00888 571 Coils Coil 134 154 - -
Pte3g00888 571 CDD FHA_PP2C70-like 165 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00888 Pte-Chr3 7379550 7385643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00888 7 563 PP2C-type Phosphatase Gene Family AT5G19280 56.655 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00888 K01090 - qsa:O6P43_021599 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00888 3 7379550 7385643 Pte3g00888 3 7379550 7385643 RCT