Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00881 ATGCATGAGTGGGAGCTAAGACAAGTAGCAGGGGGGGTGATAGATTTCATCAAGGAGTTGCACCAAGTTCTTCAAGCTCTGGAGTCTAAGAAAAGAAGAAAAAGTCTAAGCCCTAGCCCTGGCCCTAGTCCTAGTCCTAGAACACCGCAGTCAATTGTGCTTCAACAAGAAAACCCTAATTCTGGATTTAGGGGACTGGGATCAGCATGCTGCAACTCTTCAGCTGCTGATGTTGAGGTGAAAATCTCAGGAGCAAATGTAAACTTGAAAGTGATTTGCCACAGAATTCCAGGTCAGATTGTGAAGTTAATCAATGTGCTGGAAAAGCTATCACTTGAAATCGTTCATCTGAATATCAGCAGCATGGAGGAGACAGTGTTGTACTCTTTCGTCCTTAAGATAGGGCTGGAATGCCAACTGAGCGTGGAGGAATTAGCAATGGAGGTTCAACGAAGCTTCCGCTCGGATGCAATATCTGCCAACGACGTACCTCTTACCTATAATGTCAAACTTCAACAATGA 522 0.4464 MHEWELRQVAGGVIDFIKELHQVLQALESKKRRKSLSPSPGPSPSPRTPQSIVLQQENPNSGFRGLGSACCNSSAADVEVKISGANVNLKVICHRIPGQIVKLINVLEKLSLEIVHLNISSMEETVLYSFVLKIGLECQLSVEELAMEVQRSFRSDAISANDVPLTYNVKLQQ* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00881 173 MobiDBLite consensus disorder prediction 29 52 - -
Pte3g00881 173 PANTHER TRANSCRIPTION FACTOR FAMA 10 153 IPR044283 GO:0003700|GO:0010052
Pte3g00881 173 Coils Coil 172 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00881 Pte-Chr3 7305868 7308050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00881 9 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 55.556 5.24e-53 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00881 - - vri:117914990 189.889